Gene BMA10247_A0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA10247_A0560 
Symbol 
ID4889516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei NCTC 10247 
KingdomBacteria 
Replicon accessionNC_009079 
Strand+ 
Start bp509470 
End bp510456 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content69% 
IMG OID640146836 
Productputative amino acid ABC transporter, periplasmic amino acid-binding protein 
Protein accessionYP_001077761 
Protein GI126447134 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCGCG GACCTCCACC ACAGGAATTG TCGATGAAAC TGCCCTATAC GAAGTCGAAG 
TCGTTCGCCG CATCGCTCGC GCGTGCCGTC GTCGCGTTCG CGCTGGCCGG CATCGGCGCG 
GCGGCGTTCG CCGCCACGTT CGACCTGAGC CCCGAGCAGC CCGGCCGCGT GCGCGGCGCG 
CGCGACGACG CGGTGATCCG CGCGCTGCCC GCCAGCTTCA AGTTCGTCGA GCCCGATACG 
CTGACCGTCG GCATCGCGCC GAGCCAGCCG CCCATCAGCG CGTATGCGAC CGATGCGCGC 
ACCGTCGTCG GCTTCGACGC CGATCTCGCG CAACTGCTTG CCGACAGCCT CGGCCGCAAG 
CTGAAGATCG TCGCGCTCGC GTGGCCGGAC TGGCCGCTCG CGCTCGAATC GGGCCGCGTC 
GACGCGGTGC TGTCGAACGT CACCGTCACC GAGGAGCGCA AGGCGAAGTT CGATTTCTCG 
ACGTATCGCA AGGATCAGGT CGGCTTCTAC GTGAAGTCCG ACAGCAAGAT CGCGTCGATC 
AGGCAGCCGA GAGACGTCGC GGGCCTGCGC GTGATCACCG ACGCCGGCAC GAACCAGGAG 
AAGATCCTGC TCGAATGGGA TCGCGAGAAC GTCGCGCACG GGCTCAAGCC CGTCACGGTC 
CAGTACTACG ACGATCACGC GGTGAAGAGC GTCGCGTTGC AGGCCGGCCG CGCGGACGCG 
ATCTTCAGCG TGAATTCGGT GCTCGCGTAC CAGGCCGCGC AGCAGCACCG CACGAAGCTC 
GTCGGTGCGG TGAGCGGCGG GTGGCCGCGC ACGGCCGACA TCGCGGTCAC GACGCGCAGG 
GGCAGCGGCC TCGCGGCGCC GTTCACGCTT GCGATCAACG GTTTCATCCG CAACGGCACC 
TACCGGCGCG TGCTCGAGCG CTGGAGCCTC GGCTCCGAGG CGATCGACGC GTCGCGGACC 
AACCCGCCGG GCCTGCCGAA GACGTGA
 
Protein sequence
MRRGPPPQEL SMKLPYTKSK SFAASLARAV VAFALAGIGA AAFAATFDLS PEQPGRVRGA 
RDDAVIRALP ASFKFVEPDT LTVGIAPSQP PISAYATDAR TVVGFDADLA QLLADSLGRK 
LKIVALAWPD WPLALESGRV DAVLSNVTVT EERKAKFDFS TYRKDQVGFY VKSDSKIASI 
RQPRDVAGLR VITDAGTNQE KILLEWDREN VAHGLKPVTV QYYDDHAVKS VALQAGRADA 
IFSVNSVLAY QAAQQHRTKL VGAVSGGWPR TADIAVTTRR GSGLAAPFTL AINGFIRNGT 
YRRVLERWSL GSEAIDASRT NPPGLPKT