| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_A0482 |
|---|
| Symbol | |
|---|
| ID | 4890287 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009079 |
|---|
| Strand | + |
|---|
| Start bp | 431182 |
|---|
| End bp | 432306 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640146759 |
|---|
| Product | spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein |
|---|
| Protein accession | YP_001077684 |
|---|
| Protein GI | 126447731 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCGA AGCCGCGCGT GGCGCGCCGC GCTTCGTATA ACCACCACGC TTCATCATCC
GTCACGAGAG GAAACATCAT GCACCACACG TTCAACACGC CGCGCCGCGC GGTTGCGCTG
CTGTCGCTCG CCGCGTTCTG CGCGACGGCC GGCGCGGCCG AGCTGACCGT CGTCAATTTC
GGCGGCGCGA ACGGCGACGC GCAGAAGGCC GCGTTCAACC AGCCGTTCGA GAAGGCGACC
GGCAACAAGG TGACGGCCGT CGAATACAAC GGCGAGCAGG CGAAAGTGAA GGCGATGGTC
GAGGCGAAGC ACGTGAACTG GGACGTCGTC GAAGTCGAGT CGGGCGACCT GAACCGCGGC
TGCGACGAAG GCCTGTACGA GAAACTCGAC TGGGCGAAGA TCGCGAAGAA GTCCGATCTG
ATTGCCGAAT CGCCGCAAAC CTGCGGCGTC GGTTTCTTCG TGTGGTCGAC CGCGCTTGCA
TACGACGCGG ACAAGCTCAA GCGCGCGCCC GCCGGCTGGG CCGATTTCTG GGACGTGAAG
AAATTCCCGG GCAAGCGCGG GATGCACAAG GGCGCGCGCT ACAACCTCGA GTTCGCGCTG
ATGGCGGACG GCGTCGCGCC GAAGGACGTC TACAAGGTGC TCGCGACGAA GGCGGGCCAG
GATCGCGCAT TCAAGAAGCT TGACGAGCTG AAGCCGAACA TCCAGTGGTG GGAAGCGGGC
GCGCAGCCGC CGCAGTTCCT CGTCGCGGGC GACGTCGTGA TGTCGACCGC GTACAACGGC
CGCATCAGCG CCGCGCAGAA GGAAGGCAAG AACCTGAAGG TGGTGTGGAG CGGCAGCATC
TACGATCTGG ACTACTGGGC GATTCCGAAG GGCACGCCGA ACAAGGCGCT CGCCGAGAAG
TACATCGCCT ACACGCTGTC GTCGAAGCCG CAGCAGGATT ACGCGCAACA CATCGCGTAC
GGCCCCGCGA ATGTCGCCGC GATCAAGGCG CTCGACGCGA AGACGCTCGC GAACCTGCCG
AACTCGCCGG CCAACGGCAA GAACGCGGTG CTGCAGAACA TCACGTTCTG GACCGATCAC
GGCGACGAGC TCGAGCAGCG CTTTGCGGCA TGGGCGTCGA AGTGA
|
|---|
| Protein sequence | MNAKPRVARR ASYNHHASSS VTRGNIMHHT FNTPRRAVAL LSLAAFCATA GAAELTVVNF
GGANGDAQKA AFNQPFEKAT GNKVTAVEYN GEQAKVKAMV EAKHVNWDVV EVESGDLNRG
CDEGLYEKLD WAKIAKKSDL IAESPQTCGV GFFVWSTALA YDADKLKRAP AGWADFWDVK
KFPGKRGMHK GARYNLEFAL MADGVAPKDV YKVLATKAGQ DRAFKKLDEL KPNIQWWEAG
AQPPQFLVAG DVVMSTAYNG RISAAQKEGK NLKVVWSGSI YDLDYWAIPK GTPNKALAEK
YIAYTLSSKP QQDYAQHIAY GPANVAAIKA LDAKTLANLP NSPANGKNAV LQNITFWTDH
GDELEQRFAA WASK
|
|---|
| |