Gene BMA10247_A0146 details

Gene Information

• Locus tag: BMA10247_A0146
• Symbol: phbC-1
• ID: 4891387
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei NCTC 10247
• Kingdom: Bacteria
• Replicon accession: NC_009079
• Strand: -
• Start bp: 119476
• End bp: 121416
• Gene Length: 1941 bp
• Protein Length: 646 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 640146426
• Product: poly-beta-hydroxybutyrate polymerase
• Protein accession: YP_001077352
• Protein GI: 126447423
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG3243] Poly(3-hydroxyalkanoate) synthetase
• TIGRFAM ID: [TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.939998
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCCGTGT CAGTGATCGT CGACGCATGC GATCGAAGCG CGCGGGAAGC GGCGACGCCC 
GCGTCGCGGC TTCGCGCACG GCCGGCCGCA TCGGCTGCCG TGCCTCGTCA TGCGCTCGCC 
CGCGCAGCGC CAGCCGAAGG AAGCCCGATG GATACACGCC ACGCCCCCGA ATCCGGCGCG 
CCCGACGCGC CGCTGCCCGC CCACCCGCCC GCGTCCTATG CGCCGGAAAG CCCCTACCGC 
ATCTTCGATC TCGCGAAGGA AGCGTCGGTC GCGAAGCTGA CGTCGGGCCT GTCGCCCGCA 
TCGTTGCAGC TCGCGCTAGC GGACTGGCTG ATTCACCTCG CCGCCGCGCC CGGCAAGCGC 
GCGGAGCTCG CGACGCTCGC GCTCCGGCAC GCGGCGCTGC TCGGCCAATA CCTGCTCGAG 
GCGGCGACCG GGCGCACACC CGCCGCGCCC GCGCAGCCGT CGCCGGGCGA CCGGCGCTTT 
CGCGCAGGCG CGTGGCAGCT CGAGCCCTAC CGCTTCTGGC ACCAGTCGTT CCTGCTCGCC 
GAGCAGTGGT GGCGCGCGGC GACCCGCGAC GTGCCCGGCG TATCGCCGCA TCACGAGGAC 
GTCGTCGCGT TCTCCGCGCG GCAGATGCTC GACACGTTCG CGCCGGCGAA CTATGTCGCG 
ACGAACCCCG AAATCGCGCA GCGCACCGCG CTCACGGGCG GTGCGAACCT CGCGCAGGGC 
GTGTGGAACT ATCTGGACGA CGTCCGCCGC CTGATCACGA AGCAGCCGCC CGCGGGCGCC 
GAGCAGTTCG AGCTCGGCCG GAATCTCGCG ACGACGCCCG GCCGCGTCGT GTTCCGCAAT 
CACCTGATCG AGCTGCTGCA GTACAGCCCG ACGACGCCCG ACGTCTACGC GCAGCCCGTG 
CTGATCGTGC CCGCATGGAT CATGAAGTAC TACATCCTCG ATCTGTCTGC GCACAACTCG 
CTCATCCGCT ACCTGGTCGG CGAAGGGCAC ACGGTGTTCT GCATCTCGTG GCGCAACGTC 
GATGCGAGCG ACCGCGACCT GAGCCTCGAC GACTACCGCA AGCTCGGCGT GATGGACGCG 
CTCGACACGA TCGGCGCGAT CGTGCCCGGC GAGAAGATCC ACGCTACCGG CTACTGCCTC 
GGCGGCACGC TGCTCTCGAT CGCGGCGGCC GCGATGGCGA ACACGGGCGA CGATCGCCTC 
GCGTCGATCA CGCTGCTCGC CGCGCAAACG GATTTCGCCG AGCCCGGCGA GCTCCAGTTG 
TTCATCGACG ACAGCGAGAT CCACTTCCTC GAGAGCATGA TGTGGGAGCG CGGCTATCTC 
GGCGCGCACC AGATGGCGGG CTCGTTCCAG TTGCTGATGT CGAACGATCT GATCTGGTCG 
CGCGTGATCC ACGACTATCT GCTCGGCGAG CGCACGCCGA TGATCGACCT GATGGCGTGG 
AACGCCGATT CGACGCGGAT GCCTTACCGG ATGCATTCCG AGTATCTGCG CCACCTGTTC 
CTCGACAACG ACCTCGCGAC GAACCGCTAT GTGATCGACG GGCAGACGGT GTCGGTGCAC 
AACATCCGCG CACCGTTCTT CGTCGTCGGC ACCGAGCACG ACCATATCGC GCCGTGGCGC 
TCCGTCTACA AGATCCACTA CCTGAGCGGC AGCGACGTGA CGTTCGTGCT GACGGCGGGC 
GGCCATAACG CGGGCATCGT CAGCGAGCCC GGCCATGCGA AGCGCCATTA CCGGATGAAG 
ATGACGGCCG CCGCCGCGCC GAGCATCTCG CCCGACGAAT GGCTTGCCGG CGCGACCGAT 
TTCGAAGGCT CGTGGTGGCC CGCGTGGCAC GCATGGCTCG CCCGGCATTC GAGCCCGCAG 
CGCGTCGCGC CGCCGCCGCT CGGCAAGCCG GGCGCGCACA CGCTCGGCGA CGCGCCGGGC 
ACCTATGTGT TCCAGAAATA A 

 

Protein sequence

MAVSVIVDAC DRSAREAATP ASRLRARPAA SAAVPRHALA RAAPAEGSPM DTRHAPESGA 
PDAPLPAHPP ASYAPESPYR IFDLAKEASV AKLTSGLSPA SLQLALADWL IHLAAAPGKR 
AELATLALRH AALLGQYLLE AATGRTPAAP AQPSPGDRRF RAGAWQLEPY RFWHQSFLLA 
EQWWRAATRD VPGVSPHHED VVAFSARQML DTFAPANYVA TNPEIAQRTA LTGGANLAQG 
VWNYLDDVRR LITKQPPAGA EQFELGRNLA TTPGRVVFRN HLIELLQYSP TTPDVYAQPV 
LIVPAWIMKY YILDLSAHNS LIRYLVGEGH TVFCISWRNV DASDRDLSLD DYRKLGVMDA 
LDTIGAIVPG EKIHATGYCL GGTLLSIAAA AMANTGDDRL ASITLLAAQT DFAEPGELQL 
FIDDSEIHFL ESMMWERGYL GAHQMAGSFQ LLMSNDLIWS RVIHDYLLGE RTPMIDLMAW 
NADSTRMPYR MHSEYLRHLF LDNDLATNRY VIDGQTVSVH NIRAPFFVVG TEHDHIAPWR 
SVYKIHYLSG SDVTFVLTAG GHNAGIVSEP GHAKRHYRMK MTAAAAPSIS PDEWLAGATD 
FEGSWWPAWH AWLARHSSPQ RVAPPPLGKP GAHTLGDAPG TYVFQK