| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_A0136 |
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| Symbol | deoA |
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| ID | 4891296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei NCTC 10247 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009079 |
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| Strand | + |
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| Start bp | 111743 |
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| End bp | 113065 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640146416 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_001077342 |
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| Protein GI | 126445926 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02643] thymidine phosphorylase
[TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.751059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTTCC TGCCGCAGGA ATTCATCCGC AAGGTGCGCG ACCGCGCGCC GCTCGACACG
GCCGACGTCG CGCGTTTCGT CCAAGGCGTG ACGGCGGGCG ACGTGACCGA AGGCCAGATC
GCCGCGTTCG CGATGGCGGT CTATTTCAAC GAGTTGCCGC TGTCCGCGCG CATCGCGCTG
ACGCTCGCGC AGCGCGATTC CGGCGACGTG CTCGACTGGC GCGGCGCGCG CCTGAACGGG
CCGGTGGTCG ACAAGCACTC GACGGGCGGC GTCGGCGATC TGACCTCGCT CGTGATCGGG
CCGATGGTGG CCGCGTGCGG CGGCTACGTG CCGATGATCT CGGGCCGCGG CCTCGGCCAC
ACGGGCGGCA CGCTCGACAA GCTCGAGGCG ATTCCCGGTT ACGATGTCGC GCCGTCCGTC
GACATGCTGC GCCGCGTCGT GCGCGACGCG GGCCTTGCGA TCGTCGGCCA GACCGCGCAG
CTCGCGCCCG CCGACAAGCG GATCTATGCG GTGCGCGACG TGACGGCGAC CGTCGAATCG
ATCTCGCTGA TCACCGCGTC GATCCTGTCG AAGAAGCTCG CGGCGGGCGT CGGCGCGCTC
GCGATGGACG TGAAGGTCGG CTCCGGCGCG TTCATGCCGA GCGCGGAGCA ATCGGCCGAA
CTCGCGCGCA GCATCGTCGA CGTCGGCAAC GGCGCGGGGA TGAGGACGGC CGCGACGCTC
ACCGACATGA ACCAGGCGCT CGCGCCATGC GCGGGCAACG CGATCGAGGT GCGCTGCGCG
ATCGATTTCC TGACGGGCGC GGCGCGCCCC GCGCGGCTCG AAGCGGTCAG CTTCGCGCTC
GCCGCGCAGA TGCTGACGAT GGGCGGGCTT GCCGCGGACG CGCACGATGC GCGCCGCCGG
TTGCGCGCGG TGCTCGAATC GGGCGCGGCC GCGGAGCGGT TCGCGCGGAT GGTCGCGGCG
CTCGGCGGGC CCGCCGATCT GGTCGAGCGG CCCGAGCGGC ATCTGCCGCG CGCGGCTGCC
GCCGCCCCCG TGGCCGCCGC GCGCGCCGGC TGGATCGAGC GGATCGACGC GCGCGCGCTC
GGCCTGGCGG TCGTCGGCCT GGGCGGCGGG CGCGCGAAGA TCGGCGACAC GCTCGATTAC
TCGGTCGGAC TGTCCGCGCT CGCGGAGCTG GGCGAGCGCG TCGAGGCGGG CCAGCCGCTC
GCGACCGTTC ACGCGCGCGA CGCCGATTCG GCCGCGCAGG CGACCGACGC GGTGCGGCGC
GCCTACCGGA TCGGCGCGGA GCCGCCGGCG CAGACGCGCG TCGTTCATGC CGTGATCGAA
TGA
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| Protein sequence | MTFLPQEFIR KVRDRAPLDT ADVARFVQGV TAGDVTEGQI AAFAMAVYFN ELPLSARIAL
TLAQRDSGDV LDWRGARLNG PVVDKHSTGG VGDLTSLVIG PMVAACGGYV PMISGRGLGH
TGGTLDKLEA IPGYDVAPSV DMLRRVVRDA GLAIVGQTAQ LAPADKRIYA VRDVTATVES
ISLITASILS KKLAAGVGAL AMDVKVGSGA FMPSAEQSAE LARSIVDVGN GAGMRTAATL
TDMNQALAPC AGNAIEVRCA IDFLTGAARP ARLEAVSFAL AAQMLTMGGL AADAHDARRR
LRAVLESGAA AERFARMVAA LGGPADLVER PERHLPRAAA AAPVAAARAG WIERIDARAL
GLAVVGLGGG RAKIGDTLDY SVGLSALAEL GERVEAGQPL ATVHARDADS AAQATDAVRR
AYRIGAEPPA QTRVVHAVIE
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