| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A3169 |
|---|
| Symbol | |
|---|
| ID | 4904808 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | + |
|---|
| Start bp | 3088633 |
|---|
| End bp | 3090915 |
|---|
| Gene Length | 2283 bp |
|---|
| Protein Length | 760 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640146272 |
|---|
| Product | sensor histidine kinase/response regulator |
|---|
| Protein accession | YP_001077198 |
|---|
| Protein GI | 126455626 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCCG AACGGCCCGA CGCTTCACGC TCGACATCGC CCGACAACGA CGATTGGGAG
GACGATGCTT CGTTCGCGCC CGGCGCGCCG GAGCACGATT TCGCGGTGCG GCGCGTGACG
CTCATCGTGA TGCTCGTCGC CGCGATCGTG CTGCCGTGCG TATACGTCGC GGTGATGGCT
TACAACGACA TGCGCACGCG CGAGGCCACC GCGCGCGACG TGACGATGCG CACCGTGCGC
GTCGCCGAGG AGCATGCGCT GAAAGTATTC GATCTGTCGG AGACGCTCGA CGCGCGGATC
GTCGATCTCG TGCAGGATCT CGACGATGCC GCGGTGCGCA ATGCCGAGGC CGACATCCAT
GATGCGCTCA ACACGATCGG CGGCGGCTAT CCGCAGGTCG CCTCGGTGTC GATCTTCGGC
GCGAGCGGGA TGCTGCTCGC GAACAGCCTC TATTACCCGG CGCCGTATGC GTCGATCGCG
GAGCGCGACG ATTTCGTCGG CATCCGCGAC GGCAAGGTGA TCGAGCACAT CTCGCGCGTG
ATGCCGGGGC CGCTGAAGGC GGCGAATCCG GGGCCCGTGT TCAATACGGG CGTCGCGCGG
CGCCATAGCG ACGGCACGTT CGCGGGGATG GTGTCGATCG CGCTGAAGTC TTCGTATTTC
AACGCGTTCT ATCGCGATCT GCTCGGCGGC GCCGACGCGC CGATGTCGAT GGCGCTCACG
CGCACCGACG GCGCCGTGCT CGCGTCGTAT CCGCCCGCGT CGCGCGGCGC GCCGGACGAC
GCCGCATCGC AGGCCGACAG CGCGAACCCG TTCGGCGGCG CGCAAGGCGA TCAGCACGCG
GGCATCGTGC GCGTGAAGCG CGACGGCGAC AGCGAGATCG TCGCGTACCG GCAGGTCGGC
AGCTATCCCG TGTTCGTATC GTGCGCGTAC CGCACGTCGG CGATCCGTCA TGCGTGGTAC
GAGCACCTGA GCGTGCTGTT CATCTCGATG TTCGCGCCGT CCGCCGCGCT GTGGGGCGTG
ATCTGGCTGT CGCTCAAGCG GCTGCGCGCG GAGGAGCAGG CCTGGGAGCG CTGGCAGGCG
GAGGCGTCGA TGCGGCGCTC GATCGAATCG GCGTACCGGC AGTCGCGCAA GATGGAGACG
CTCGGCAACC TGGTCGGCAG CGTCGCGCAC GATTTCAACA ACCTGCTGAT GATCATCTCG
AGCAACGTGC AGATCGCGCG GCGGCGCGGC GTTCAGCATC TGGACACCGA GCTCGCCGCG
ATCGAGCGCG CGCTGAAGAA CGGCCAGTCG CTCACGCGCC AGTTGCTGGG CGTCGCGCGC
AAGCAGCCGC TGCGCAGCGA GACGATCGAC ATCGCGCACT GGCTCGCGTC GTGCCGCGAG
TTGCTGAAGA CGTCGCTCGG CTCGAAATCG ACGCTCGCCG TCGACACGCA GCTCGACCTG
TGGCCCGTGC GCGTCGACGT CGCGGAGCTT GAGCTCGCGA TGATCAATCT CGCGGTCAAC
GCCCGCGACG CGATGCCGCA GGGCGGGCGC TTCAAGATCA GCGCGCACAA CATCACGTTC
CGCCGCGAGG ACGGCTTTCC GCTGACGGGC GACTTCGTGC AGATCTCGGT CGAGGATACC
GGCCTCGGCA TGTCGCCCGA GGTGCTCGCG CGCGCGTTCG AGCCGCTTTT CACGACGAAG
GCGAAGGGGA TGGGCACGGG CCTCGGACTG CCGCAGGTAT TCGCGTTCTG CGAGCGCTCC
GGGGGGCTCG CGACGATCGA CAGCGAAGTG GGCGCGGGCA CGTCGGTGCG GCTCTACCTG
CCGCGCACGA CCGACGCGGT GCCGCCCGTC GACGCGCCCA ACGCCGTCGA CAATCTCGCC
GCCTCGACGC CTGCGGGGCT GCGAATCCTG CTCGTCGAGG ACAATGGTGA AGTCGCGGCG
GGCACCGAGG CGCTGCTCGA GCTGCTCGGC CATCAGGTCA CGCACGCGCC GAACGCGGAC
GACGCGTTGC GCATGCTGAA CGCCGCAGGC GCCGAGCCAG GCGCGCCGGG CACGTTCGAT
CTCGTGATCT CGGACATCCA CATGCCGGGC ACGATCAACG GGATCGATCT CGCGGAGGCG
ATCGAACGCG GCGACATGAA GCTGCCGGTG ATTCTCGTCA CCGGCTACGC GGAGGAGTTC
GACCGGACGC GCCGCGTCCA TGCGCGGTTG CTGTCGAAAC CGTTCGACAT CGCGCTGCTC
GACGACTTGC TGCAGAAGAT CCAGCACGAG CGCGACGCGC GGCTCGCGGG GCATGAGGAT
TGA
|
|---|
| Protein sequence | MTPERPDASR STSPDNDDWE DDASFAPGAP EHDFAVRRVT LIVMLVAAIV LPCVYVAVMA
YNDMRTREAT ARDVTMRTVR VAEEHALKVF DLSETLDARI VDLVQDLDDA AVRNAEADIH
DALNTIGGGY PQVASVSIFG ASGMLLANSL YYPAPYASIA ERDDFVGIRD GKVIEHISRV
MPGPLKAANP GPVFNTGVAR RHSDGTFAGM VSIALKSSYF NAFYRDLLGG ADAPMSMALT
RTDGAVLASY PPASRGAPDD AASQADSANP FGGAQGDQHA GIVRVKRDGD SEIVAYRQVG
SYPVFVSCAY RTSAIRHAWY EHLSVLFISM FAPSAALWGV IWLSLKRLRA EEQAWERWQA
EASMRRSIES AYRQSRKMET LGNLVGSVAH DFNNLLMIIS SNVQIARRRG VQHLDTELAA
IERALKNGQS LTRQLLGVAR KQPLRSETID IAHWLASCRE LLKTSLGSKS TLAVDTQLDL
WPVRVDVAEL ELAMINLAVN ARDAMPQGGR FKISAHNITF RREDGFPLTG DFVQISVEDT
GLGMSPEVLA RAFEPLFTTK AKGMGTGLGL PQVFAFCERS GGLATIDSEV GAGTSVRLYL
PRTTDAVPPV DAPNAVDNLA ASTPAGLRIL LVEDNGEVAA GTEALLELLG HQVTHAPNAD
DALRMLNAAG AEPGAPGTFD LVISDIHMPG TINGIDLAEA IERGDMKLPV ILVTGYAEEF
DRTRRVHARL LSKPFDIALL DDLLQKIQHE RDARLAGHED
|
|---|
| |