Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A3113 |
Symbol | |
ID | 4903756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | - |
Start bp | 3028367 |
End bp | 3030886 |
Gene Length | 2520 bp |
Protein Length | 839 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640146217 |
Product | penicillin-binding protein |
Protein accession | YP_001077143 |
Protein GI | 126456748 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.988566 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCGTCCT TCCTCGAGCG TTGCGCGGCC TGGCTCGCCG CCGCGAAGCC GCACGCCGTC GCCGTCCTGC ACCGCCTGCG CCACCCGACG CGGCGCGGCG TGCTGCTCGC CGTCGCCGCT CTCCCCGCGC TGTGCGTGCT CTACGTGCTC GCGCTGATCC CGTTCACGCC GAGCATCGGC GACATCCGCA AGGCGCGCGT CGACGCGCCC GCGCAGATCC TGTCCGCCGA CGGCAAGCTG CTCGCCGAGT TCAAGCCGTC GAACCGCGAA TGGGTGCCGC TCGCCGACAT CTCGCCGAAG ATGGTCGACG CGCTGATCTC GACCGAGGAC CATCGCTTCT ACGAGCACCA CGGCCTCGAC TGGCGGCGCA CCGCGGGCGC CGCGCTGCGC ACGTTCTCCG GCGACCGGCA GGGCGGCTCG ACGATCACGC AGCAGCTCGC GCGCAACCTG TATCCGGACG AGATCGGCCG CGCGCCGACG CTCACGCGCA AGCTGAAGGA AGCGATCACC GCGCTGAAGA TCGAGGCGGT CTACAGCAAG GCGCAGATCC TCGAGACGTA TCTGAACACG GTGCCGTTCC TGTACAACGC GTACGGCGTC GAGATGGCCG CGCGCACGTA CTTCGACAAA TCGGCCGACC AGCTCGACGC GCTCGACGCG GCGACGCTCG TCGGCATGCT CAAGGGCAAC AGCTATTACA ACCCGGTGCT GAACCCCGAG CGCGCGCTCG CGCGCCGCAA CACGGTGCTC GCGCAGATGG TGAAGTACGG CAGGCTCTCG CCCGCCGCGT ATGCGTCGCT GCAGAAGAAG CCGCTGCGCA TCGATTTCGA GCGGCAGAAG GAGCCGCCCG GCCCCGCGCC GCATTTCGCG CAGCAACTGC GCAAGTGGCT GATCGCGTGG GCCGACCGCA ACGATTACAA CATCTACTCC GACGGCCTCG TCGTGCGCAC GACGATCGAT TCGCGGCTGC AGACGTATGC GACGCAGGCG CTCGCGCGTC AGACCAACCA GCTGCAGGGC GTCGCGAACG GGATGTGGAA CGCCGGCAGC GGCTGCGCCC CCGGCAATCC GCTGTTTCGC GCATTCGTGC GCGAGACGCC GGAGTTCCGC GCGGCGCTCG ACGGCGGCGC GACCGGGGAC GCCGCGCTCA AGCGCCTGCT CGCCGACCGC GGCTTCGCGC GCGCGCTCTG CAAGGCGAAG GCCGACGTGC AGGCGGGCTT TCTCGCGATC GATCCGCGCA ACGGGCAGAT CAAGGCGTGG GTCGGCAGCC GCGATTTCAC GGCCGAGCCG TTCGATCACG TGCAGCAGGC GCGCCGGCAG CCGGGCTCGA CGTTCAAACC GTTCGTCTAC GGCGCGGCGT TCGCGGCGGG CGCGACGCCC GACGATACGT TCGTCGATCA GCCGGTCGAG ATCCCGCTCG CGGGCGGCGA GATCTGGCGG CCCGACGACG ACGCGCCGCC CACGAACAAG CCGATGACGC TGCGCGACGC GATCGCGTAC TCGCGCAACC GGATCACCGC GCAACTGATG ATGAAGGTCG GCCCGCAGAA GGTGGCGCGC CTCGCGCGCG CGATGGGCGT GCGCGACAGC GCGCTCGATG CGGTGCCGTC GCTCGCGCTC GGCACGAGCC CCGTGACGCT CAAGGAGATG GTGTCCGCCT ACGCGACGAT CGCGAACGTC GGCGAATACG TCGAGCCGCG GATGGTCACG CGCATCGAGG GCCGCAACGG CGAGGTGCTC GCCGAGTTCG CGAGCGCGAC GCCCGAGCGC GCGCTCGACG CGGCGGCGGC GCGCACGCTG ATCGACGTGA TGCGCGGCGT CGTCGAGCGC GGCACCGGCG CGGCGATCCG CTCGCGCTAC GGGATTCGCG CGGACGTCGC CGGCAAGACC GGCACGACGC AGGGCGACAC CGACGGCTGG TTCATCCTGA TGCAGCCCGA GCTTGTCGCG GGCGCGTGGG TCGGCTTCGA CGACGGCCGC GTGACGCTCG GCGGCGATTG GGGGCAAGGC GCGCGCAGCG CGCTGCCGAT CGTCGGCGAT TTCTATCAGC GGGCGATTCG CGCGCGGCTC GTCGATACGC GCGAACGCTT CGCGACCGAA GCGCCGCCGA GCGCGTTCGA CACGTTCCGC AACAAGCTCG GCGACTGGTA TCGCTACCTG TTCGAGAAGC CCGAGCCGCC GCGCAAGGCC GCGCCGCCGA AAGCGCCGCG CGCGCCGCTC GAGGAGGTGA TGCCGGCTTC CGAGGTCGAG GCGGCGTCGG CGGCGGTCGC GCGCGCCGCG TCGGAAGCGG CTGCAGTGGC ATCGGCCGCG TCGACCGCAT CGGCCGCACC GCCGGCGAGC GGCGTGCCGT TCGCGCCGGG CGGCGCGTCG GCGCCGGCGC TGCCGCCGCT GTTGCCGCCG ATGCCACAGT CTGCTCCGTT GCCGCCTGCC GCGCAGCCGG GCAGCAGCCT GCCGAACGAC AACGCGCCGA TGTCGCCGAC GCCGACGCCC GATGCGCCGG CCGCGGGCGG CAGCAATTAG
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Protein sequence | MSSFLERCAA WLAAAKPHAV AVLHRLRHPT RRGVLLAVAA LPALCVLYVL ALIPFTPSIG DIRKARVDAP AQILSADGKL LAEFKPSNRE WVPLADISPK MVDALISTED HRFYEHHGLD WRRTAGAALR TFSGDRQGGS TITQQLARNL YPDEIGRAPT LTRKLKEAIT ALKIEAVYSK AQILETYLNT VPFLYNAYGV EMAARTYFDK SADQLDALDA ATLVGMLKGN SYYNPVLNPE RALARRNTVL AQMVKYGRLS PAAYASLQKK PLRIDFERQK EPPGPAPHFA QQLRKWLIAW ADRNDYNIYS DGLVVRTTID SRLQTYATQA LARQTNQLQG VANGMWNAGS GCAPGNPLFR AFVRETPEFR AALDGGATGD AALKRLLADR GFARALCKAK ADVQAGFLAI DPRNGQIKAW VGSRDFTAEP FDHVQQARRQ PGSTFKPFVY GAAFAAGATP DDTFVDQPVE IPLAGGEIWR PDDDAPPTNK PMTLRDAIAY SRNRITAQLM MKVGPQKVAR LARAMGVRDS ALDAVPSLAL GTSPVTLKEM VSAYATIANV GEYVEPRMVT RIEGRNGEVL AEFASATPER ALDAAAARTL IDVMRGVVER GTGAAIRSRY GIRADVAGKT GTTQGDTDGW FILMQPELVA GAWVGFDDGR VTLGGDWGQG ARSALPIVGD FYQRAIRARL VDTRERFATE APPSAFDTFR NKLGDWYRYL FEKPEPPRKA APPKAPRAPL EEVMPASEVE AASAAVARAA SEAAAVASAA STASAAPPAS GVPFAPGGAS APALPPLLPP MPQSAPLPPA AQPGSSLPND NAPMSPTPTP DAPAAGGSN
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