| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A3102 |
|---|
| Symbol | |
|---|
| ID | 4905321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | + |
|---|
| Start bp | 3016477 |
|---|
| End bp | 3017802 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640146205 |
|---|
| Product | major facilitator family transporter |
|---|
| Protein accession | YP_001077131 |
|---|
| Protein GI | 126456318 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCATATTC ATCCAGCCGA CGTCGACGAC GGCGCGCTCG CCGCGCCCAT TCCCCGTCCG
TATGCGTGGA CCGTGTTCGC GCTCGCGTTC GCGCTGCTGC TGTCCGACTA CATGTCGCGG
CAGGTGCTCA ACGCCGTGTT TCCGCTGCTC AAGGCCGCGT GGGGCCTGTC CGACACGCGG
CTCGGCTCGT TGAGCGGCAT CGTCGCGCTG ATGGTCGGCA CGCTGACATT TCCGCTGTCG
GTGCTCGCCG ACCGCTGGGG CCGCGTGCGC AGCATCACGC TGATGGCGGC GCTCTGGAGC
GTCGCGACGC TCGGCTGCGC GGCCGCGACG AGCTACGGCG AGTTGCTCGT CGCGCGCGCG
TTCGTCGGCG TCGGCGAGGC CGCGTACGGC AGCGTCGGCG TCGCGCTGAT CCTCGGCCTC
TTCCCGCCGC ATCTGCGCTC GACGCTCACC GGCGCGTTCA TGGCGGGCGG CGCGTTCGGC
TCGGTGCTCG GCATGGCACT GGGCGGCGCC GTCGCGACGC AACTCGGCTG GCGCGCTTCG
TTCGGCGCGA TGGCGTGCCT CGGCTTCGCG CTCGTCGTCT GCTTTCGGCT CGTCGTGACC
GAGCGGCGCA TCGCGGGCAG CGGCGCGCGC GCGGCGCGCT CGGGCCGCGA ACGCGCGCCG
GCACTGGCGC ATGCGAGCTT GCGCACGGTG CTCGCCGAGC TGTTCTCGAC GGTGTCGGTC
GTCTGCGCAT ATGTCGGCAG CGGGTTGCAG CTCTTCATCA TGGGCGCGGT GATCGCATGG
ATGCCGAGCT TCCTCAATCG CTACTACGCG CTGCCGCCCG ACAAGGCCGC GGCCGCGGCC
GCGGGATTCG TGCTGCTCGG CGGCTCGGGC ATGATCGCGT GCGGCATCGT CACGGACCGG
CTGAGCCGTG CGTGCCCGGA GCGCAAGTGG GCAATGGCGA TCGTGTACTG CGCGATTTCG
TTCGCGCTGC TCGCCATCGG CTTTCGTCTG AGCCCCGGCG CGCCGCAGCT CGGGCTACTC
GCGCTCGGCA TGTTCGTCGT CGCCGGCACG TCGGGGCCCG CGGGCGCGAT GGTCGCGAAC
CTCACGCCGC CGTCGATCCA CTCGCCCGCG TTCGCGACGC TCACGCTCGT CAACAACCTG
CTCGGGCTCG CGCCCGGGCC GCTCGTCACC GGCTTCATCG CCGACCGGAT CGGGCTCGTC
GGCGCGTTGC AGATCGCGCC GCTCGTCGCG CTCGCCTCGG CGTTCGCGTT CGCGGTCGGC
CGCTTCCGTT ACGGCGACGG GCTGCGCCGC CTGAATCCGC TGTCGCCGTC GGCCGCCGCC
GAATGA
|
|---|
| Protein sequence | MHIHPADVDD GALAAPIPRP YAWTVFALAF ALLLSDYMSR QVLNAVFPLL KAAWGLSDTR
LGSLSGIVAL MVGTLTFPLS VLADRWGRVR SITLMAALWS VATLGCAAAT SYGELLVARA
FVGVGEAAYG SVGVALILGL FPPHLRSTLT GAFMAGGAFG SVLGMALGGA VATQLGWRAS
FGAMACLGFA LVVCFRLVVT ERRIAGSGAR AARSGRERAP ALAHASLRTV LAELFSTVSV
VCAYVGSGLQ LFIMGAVIAW MPSFLNRYYA LPPDKAAAAA AGFVLLGGSG MIACGIVTDR
LSRACPERKW AMAIVYCAIS FALLAIGFRL SPGAPQLGLL ALGMFVVAGT SGPAGAMVAN
LTPPSIHSPA FATLTLVNNL LGLAPGPLVT GFIADRIGLV GALQIAPLVA LASAFAFAVG
RFRYGDGLRR LNPLSPSAAA E
|
|---|
| |