Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A3048 |
Symbol | |
ID | 4904853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | - |
Start bp | 2966623 |
End bp | 2967924 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640146151 |
Product | putative phosphatidylserine decarboxylase |
Protein accession | YP_001077077 |
Protein GI | 126457270 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0688] Phosphatidylserine decarboxylase |
TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.65507 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAACC GAACGAACGC AACCCACGCG ACGAACGCGA CGAACGCGAC AAATGCCGCC CGTGAGGCGG CCGCCGAGCG CCGACGCCTA GGCGGATGGC TGCCCGCCGA GGAGGCGGCG CTCGCGCGCT ATCGGAAGAC GCTCGCCGCG CACGCGCGCG AGCACGCGGA CGGCGTGCCG ATGACGGAGG CGGTGCGCGA GCTCGCGGCG CTCGCCGAAG GCGAGCCGCC GCTGCGCATG GCGCTGACGC GCGCGATCGA CGAGGCGCGC TCGCGCGGCT ACGAGCTCGG CTACGAGACG ATCGGCGAAC TGATGGCGGT GATCGATTTC GTGATGACGT ACGCGCCGCC GTTCAGCGAA TCCGGGCTCG TGGTCTGCCC GCTGAATGCG CTGCTCGACT GGCCGCTTTG CATGCCGTCC GGCTACGCGT TCTTTCGCGA CCGCGCGGTG AACGCGCAAC TCAAGCGCGT GCTGAACGTA TGGTGCGGCT TTCTGGGCGG CCCGCATTCG CGCGCGCACC TGAACGCGTC GGAGCCGGAC GGCTGGTTCA GCGCGGAGGC CGTGAAGCGG ATCGGCATGT CGCAGTTCCA TTGCGATCCG CAACTGCCCT ACTGGGGCTT CGCCTCGTGG AACGATTTCT TCACGCGGCG CTTTCTGCCC GACGCGCGGC CCGTCGCGGC GCCGGACGAT CCGGCCGTGA TCGTCAGCGC ATGCGAGGCC GCGCCGTATC ACGTCGCGCA CGATCTGAAG CTGCTCGACA CGTTCTGGAT CAAGTCGCAG CCGTATTCGC TGCGCGACAT CTTCACCGCG GCGCGCGGCG AGCTCGCGCG CGGCTTCGTC GGCGGCTCGC TGTACCAGGC GTTCCTGAGC GCCTACGATT ATCACCGCTG GCATGCGCCC GTCGCGGGGC GCATCGCGCA CGCGTATCTC GTCGACGGCA CCTACTATTC GAGCACCGAG GCCGAAGGCG CGGACCCGGC CGGGCTCAAC GATTCGCAGG GCTACATGAC GGCCGTCGCG ACGCGCGCGG TGATCGTCAT CGATGCCGAT GCGCCGGAGA TCGGCCGCGT CGCATGCGTG TTCGTCGGGA TGGGCGAAGT GTCGTCGTGC ATGATCGACG CGCTGCCCGG GCAGCATGTC GAGAAGGGCG AGGAAATCGG CTACTTCCAG TACGGCGGCT CGACATACTG CATGCTCTTC GAGCCGGGCG TGATCGGCAG CTTCGTCGCG CATCCGCGTT ATCACGAAGG CGCGCCGGCC GTGCAGGTGA ACGCGGAAGT GGCGGCCGTC GCGGCGAAGT GA
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Protein sequence | MTNRTNATHA TNATNATNAA REAAAERRRL GGWLPAEEAA LARYRKTLAA HAREHADGVP MTEAVRELAA LAEGEPPLRM ALTRAIDEAR SRGYELGYET IGELMAVIDF VMTYAPPFSE SGLVVCPLNA LLDWPLCMPS GYAFFRDRAV NAQLKRVLNV WCGFLGGPHS RAHLNASEPD GWFSAEAVKR IGMSQFHCDP QLPYWGFASW NDFFTRRFLP DARPVAAPDD PAVIVSACEA APYHVAHDLK LLDTFWIKSQ PYSLRDIFTA ARGELARGFV GGSLYQAFLS AYDYHRWHAP VAGRIAHAYL VDGTYYSSTE AEGADPAGLN DSQGYMTAVA TRAVIVIDAD APEIGRVACV FVGMGEVSSC MIDALPGQHV EKGEEIGYFQ YGGSTYCMLF EPGVIGSFVA HPRYHEGAPA VQVNAEVAAV AAK
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