Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A3042 |
Symbol | |
ID | 4903986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | - |
Start bp | 2958414 |
End bp | 2959037 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640146145 |
Product | HAD family hydrolase |
Protein accession | YP_001077071 |
Protein GI | 126458580 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0241] Histidinol phosphatase and related phosphatases |
TIGRFAM ID | [TIGR00213] D,D-heptose 1,7-bisphosphate phosphatase [TIGR01656] histidinol-phosphate phosphatase family domain [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCGTGA CCGACGCGCG CGCGCGCGGC GCCGTGCTGC TCGACAAGGA CGGCACGCTG CTCGAAAACG TGCCGTACAA CGTCGATCCC GCGCGGATGC GGCTCGCGCG CGGCGCGGCG CGCGCGCTCG CGACGTTCGG CGAGCTCGGC ATGCCGATCG CCGTCGTGTC GAACCAGCCG GGCGTCGCGC TCGGACGCTT TCCGGAAACC GCTTTAGGCG CGGCCCGCCA TCGTCTAGCC GAGCTGTTCG CTCAGCAAGG CGCGATGCTG GCGGGCTTTT TTTATTGTCC TCACCACCCG GCCGGCACGG TCGTGCGCTA CGCGTGCGAT TGCGCGTGCC GCAAGCCGCA ACCGGGCCTG CTGTTTCGCG CGGCCGCGCA GCTCGGCGTG TCGCTCGACG CGAGCTGGAT GATCGGCGAC ATCCTCGACG ACGTCGAGGC CGGCCGCGCG GCGGGCTGCC GGACGATTCT CGTCGATTGC GGCAACGAGA CCGAATGGCG CTATGGCGGG CTGCGCACGC CGGATTTCAT CGCGTCGCGG CTCGACGACG CCGCGTGGAT CGTCGCGCGC GAATGCGCGG CGACGGCCGC GCCGGGCGAA GCGCCGCAAG AGGGGCGGCG ATGA
|
Protein sequence | MAVTDARARG AVLLDKDGTL LENVPYNVDP ARMRLARGAA RALATFGELG MPIAVVSNQP GVALGRFPET ALGAARHRLA ELFAQQGAML AGFFYCPHHP AGTVVRYACD CACRKPQPGL LFRAAAQLGV SLDASWMIGD ILDDVEAGRA AGCRTILVDC GNETEWRYGG LRTPDFIASR LDDAAWIVAR ECAATAAPGE APQEGRR
|
| |