| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A2968 |
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| Symbol | |
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| ID | 4906085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | + |
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| Start bp | 2891677 |
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| End bp | 2892636 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640146071 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001076997 |
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| Protein GI | 126455503 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAACC TCAACGTCAT GCATATCCTG CTGCTGCTCG GCCTGTTCGC GATCGTCGTC
GCGGGCGTGA TGGCCACGTG GCTCGCCTTC GCGCCGCGCG GCCTCGCGCG GCGTCTCGAG
CAGATCGGCG GCGCCGGCGC GGTCGCGGCG GGCGACGGTC GCGCGCCGCC CGCCGTCTGG
ATCGAGAAGC TCGCCGAGAT CTCGCAGCCG ATCTCGAAGC TGTCGCTGCC GAAGTCCGGC
TGGGAGAACT CGCCGCTGCG GCTGCGCCTC ATCAATGCCG GATGGCGCTC GCCGGGCGCC
GCGCACCTGT ATTTCGCGGC GAAGACCGTG CTCGCGCTCG CGCTGCCCGC GGCGGCGATG
CCGTTGCTGA TCGGCACCGC GATCGCGGAC AGCCCGTACT CGGTATCGGC GATGCTCGTG
CTGATCGGCG CATTCGGCTT CTATCTGCCG AACGCGATGC TCGCGCGCCG GATCGCGGCG
CGGCAGCGGA TGATCGTCGA GGATTTTCCG GACGCGCTCG ATCTGCTGAC CGTGTGCGTG
GAAGCGGGGC TCGGCCTCGA CGCGGCGCTG ACGAAGGTCG CCGATGAGCT GCGGCTGCGC
AGCCCGGTGG TCGCCGACGA GCTCGGGCTG ATGCTGCTCG AGATGCGCTC CGGCTTCACG
AAGGAAACCG CGCTGCGCAA CCTCGCGCTG CGCACGGGGG CCGAGGACGT CGACGCGTTC
AGCACGATGC TGATCCAGGC GGACCGCTTC GGCACGAGCA TCGGCGCCTC GCTGCGCGTG
TTGTCCGACA CGCTGCGCAC GCAGCGGCGC ATGCGCGCGG AGGAGCGCGC GGCGAAGATC
GCGCTGAAGC TGCTGTTTCC GCTGATCTTC TGCATCTTTC CCGCGCTGCT GACGGTGCTG
CTCGGGCCCG CGTTCATCCA TATCTACCGG ACGCTGCTGC CGACGATGGC GGGCGGCTGA
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| Protein sequence | MENLNVMHIL LLLGLFAIVV AGVMATWLAF APRGLARRLE QIGGAGAVAA GDGRAPPAVW
IEKLAEISQP ISKLSLPKSG WENSPLRLRL INAGWRSPGA AHLYFAAKTV LALALPAAAM
PLLIGTAIAD SPYSVSAMLV LIGAFGFYLP NAMLARRIAA RQRMIVEDFP DALDLLTVCV
EAGLGLDAAL TKVADELRLR SPVVADELGL MLLEMRSGFT KETALRNLAL RTGAEDVDAF
STMLIQADRF GTSIGASLRV LSDTLRTQRR MRAEERAAKI ALKLLFPLIF CIFPALLTVL
LGPAFIHIYR TLLPTMAGG
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