| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A2965 |
|---|
| Symbol | |
|---|
| ID | 4905858 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | + |
|---|
| Start bp | 2888021 |
|---|
| End bp | 2889229 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640146068 |
|---|
| Product | response regulator |
|---|
| Protein accession | YP_001076994 |
|---|
| Protein GI | 126457732 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4963] Flp pilus assembly protein, ATPase CpaE |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.206584 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAACA TCCTCGTCGC TTCCGAAGAC GCATCGCGGC TCGCGCATCT CGCGCGGCTC
GTGGGCGACG CCGGCCGCTA TCGCGTCACG CGCACGGTCG GCCGCGCCGC GCAGATCGTC
CAGCGCACCG ACGGGCTCGA CGCGTTCGAC ATCCTGATGA TCGACGGCGC CGCGCTCGAC
ACCGCCGAGC TCGCCGCGAT CGAAAAGCTG AGCCGCCTGC ATCCGGGCCT CACATGCCTG
CTCGTGACGA CCGATGCGTC GTCGCAGACG CTGCTCGATG CGATGCGCGC CGGCGTGCGC
GACGTGCTGC GCTGGCCGCT CGAGCCGCGC GCGCTGGACG ATGCGCTCAA ACGCGCGGCC
GCGCAGTGCG CGCAGCGCGA CACGCCCGAC ACGCGGATCG TATCGTTCAT GTCGTGCAAG
GGCGGCGCGG GCACGAGCTT CATCGCGGGC AACATCGCAT ACGAGATCGC CGAAGGCTCG
AAGCGCCGCA CGCTGCTCAT CGACCTGAAC CAGCAGTTCG CCGACGCCGC GTTCCTCGTG
AGCGACCAGA CGCCGCCGTC GAGCGTCGCG CAGCTCTGCG GGCAGCTCGA ACGCCTGGAC
GGCGCGTTTC TCGACGCGAG CGTCGTGCGC GTGACCGACA CCTTCCACGT GCTCGCGGGC
GCGGGCGATC CGATCAAGGC CGCCGATATC CGCGAGGATG CGCTCGAATG GATTCTCGGC
GTCGCCGCAC CACGCTACGA CTTCGTGATC TTCGATCTCG GCGTCAGCCT GAACGCGGTG
TCGATGGTCG CGCTCGACCG CAGCGACCAC ATCGAAGTCG TGCTTCAGCC GAGCATGCCG
CACGTGCGCG CGGCGCGCCG CCTGCAGGAG CTGCTCGCGT CGCTCGGCTG CCCGCCCGAG
CGCATCCAGC TGGTGCTGAA CCGGCAGACG CGCGCGTCCG AGCGCGCGCG CGCGGCGCTC
GAGGAAGTGT TGAGCACGCG CGCGGCGCAC GTGATCGCCG ACGATCCCGC CACGGTCAAC
GAGGCCGTCG ACCAGGGCGT GCCGCTGTCG CGGCTGTCGC GCAACTGCGG CATCGCGCAC
AGCCTGCAGG CCTTCGCCAG GCAGCTCGCC GAAGACGAGC AACGGCCACG GCGCGACAGC
ACGCGAGACG CGCCGTTCCT CGCCCGGCTC TTCGGCCGCG GCGCGGCCCC CAAACTCAAA
TCGATGTAG
|
|---|
| Protein sequence | MINILVASED ASRLAHLARL VGDAGRYRVT RTVGRAAQIV QRTDGLDAFD ILMIDGAALD
TAELAAIEKL SRLHPGLTCL LVTTDASSQT LLDAMRAGVR DVLRWPLEPR ALDDALKRAA
AQCAQRDTPD TRIVSFMSCK GGAGTSFIAG NIAYEIAEGS KRRTLLIDLN QQFADAAFLV
SDQTPPSSVA QLCGQLERLD GAFLDASVVR VTDTFHVLAG AGDPIKAADI REDALEWILG
VAAPRYDFVI FDLGVSLNAV SMVALDRSDH IEVVLQPSMP HVRAARRLQE LLASLGCPPE
RIQLVLNRQT RASERARAAL EEVLSTRAAH VIADDPATVN EAVDQGVPLS RLSRNCGIAH
SLQAFARQLA EDEQRPRRDS TRDAPFLARL FGRGAAPKLK SM
|
|---|
| |