| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A2926 |
|---|
| Symbol | |
|---|
| ID | 4905471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | - |
|---|
| Start bp | 2857232 |
|---|
| End bp | 2858422 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640146029 |
|---|
| Product | glycosyl transferase, group 2 family protein |
|---|
| Protein accession | YP_001076955 |
|---|
| Protein GI | 126456417 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
|---|
| TIGRFAM ID | [TIGR03469] hopene-associated glycosyltransferase HpnB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.896752 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTCA TCGTCGTGTT TCTGCTGTCT TGCCTGTCGC TCGTGATCTG GCTCGTGCTG
CTGTTCGGGC GCGGCGGCTT CTGGCGCGCG CGTGCCGCGC GGCGGCTGCC GCCCGACGCG
CGCGGCGCGG CCGCGGCCGC CGGCTGGCCG GCCGTCGCGA CCGTCGTGCC CGCCCGCAAC
GAGGCGGACG TGATCGGCGA GGCGGTTCGC TCGCTCGTCG AGCAAGCGTA CGAAGGCGCG
TTTCACCTGA TCGTCGTCGA CGACCACAGC ACCGACGGCA CCGCCGAGGC CGCGCGCGCG
GCCGCGGCGG CCGTCGGCTG CGCCGACCGG CTGACCGTGC TCGCCGCGCA GCCGCTGCCC
GCCGGCTGGT CGGGCAAGGT GTGGGCGCAG TCGCAGGGGA TCGCCGCGGT GCGCTCGCTC
GGGCTGCCCG CCGACTACCT GCTGCTGACG GACGCCGACA TCGGTCATCC GCCGGACGCG
GTCGCGCAGC TCGTCACGCG CGCGCAGGCG GAGCAGCGCG ATCTCGTATC GCTGATGGTG
CGGCTGCGCT GCGATTCGTT CTGGGAAAAG GCGCTGATTC CGGCGTTCGT GTTCTTCTTC
GCGAAGCTCT ACCCGTTCTC GTGGATCAAC GATCCGCGCA ACCGGACGGC GGGCGCGGCG
GGCGGCTGCA TGCTCGTGCG CCGCGACGCG CTCGAGGAGG CGGGCGGCAT CGAATCGATC
CGCGGCGCGC TGATCGACGA TTGCAGCCTG GCCGCGCAGA TCAAGCACCG CGGCGCCGGC
CGCCACCCGA TCCGGCTCGA TCTCGCCGAT CGCAGCGTGT CGTTGCGGCC GTACGACAGC
TGGCGCGACA TCTGGAACAT GATCGCGCGC ACCGCGTTCA CGCAGTTGCG GTATTCGCCG
GTGCTGCTGC TCGGCACGCT CGTCGGGATG ACGATCCTCT ACCTGGTGCC GCCCGTCGCC
GCGCTCGCGT ACGGCGCGCG CGCGTGGCCG GCATGGCTCG CGTGGGCGTC GATGTGCACT
GCCTATGCGC CGATGCTCAG CTACTACCGC CGCTCGCCGT GGTGGGCGCC GGCGCTGCCG
CTCGTCGCGC TGTTCTATGT CGGCGCGACG TTCGCGTCGG CCGTGCGCTA CTGGCGCGGC
AAGGGCGGAC AGTGGAAGGC GCGCGTGCAG GCGCCGGTGC GGGATCGTTG A
|
|---|
| Protein sequence | MTLIVVFLLS CLSLVIWLVL LFGRGGFWRA RAARRLPPDA RGAAAAAGWP AVATVVPARN
EADVIGEAVR SLVEQAYEGA FHLIVVDDHS TDGTAEAARA AAAAVGCADR LTVLAAQPLP
AGWSGKVWAQ SQGIAAVRSL GLPADYLLLT DADIGHPPDA VAQLVTRAQA EQRDLVSLMV
RLRCDSFWEK ALIPAFVFFF AKLYPFSWIN DPRNRTAGAA GGCMLVRRDA LEEAGGIESI
RGALIDDCSL AAQIKHRGAG RHPIRLDLAD RSVSLRPYDS WRDIWNMIAR TAFTQLRYSP
VLLLGTLVGM TILYLVPPVA ALAYGARAWP AWLAWASMCT AYAPMLSYYR RSPWWAPALP
LVALFYVGAT FASAVRYWRG KGGQWKARVQ APVRDR
|
|---|
| |