| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A2917 |
|---|
| Symbol | |
|---|
| ID | 4903748 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | + |
|---|
| Start bp | 2848609 |
|---|
| End bp | 2849688 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640146020 |
|---|
| Product | outer membrane porin |
|---|
| Protein accession | YP_001076946 |
|---|
| Protein GI | 126457051 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3203] Outer membrane protein (porin) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAAC GACTGTCCGC GCTTTGCGGA CTGGGCCTCG CCTCGGCCGG CGCATGCGCG
CAAACGAGCG TGACGCTTTA CGGCGTCGCG GACGCGTACG TCGAGTACGC GACGAACCAG
GCGGACGCGA AAGGCGAGCC CGCCGCGCTC GCGCGAATGG GCTCGGGCGG CAAGAGCGGC
TCGCGCTGGG GAATCAAGGG CACTGAAGTG CTCGGCGGCG GCTGGCGCGC CGCGTTCCGG
CTCGAGAGCG GCGTCAACCT GAACAACGGC GCCGGCACGG GCGCGGGCGG CTTCGACCGC
TCCGCGTGGG TCGGGCTCGA GCATCCGCGC TGGGGCGCGC TGCGCTTCGG TCGCCAATAC
ACGACGATGT TCGACATCAT GGAGCACTAC TCGCCGACGG GCGCGTATTC GACGCTGTAC
GAACCTGACG GCGCGATCGT CGGCATCAGC TTTCGCGAGA ACAACGTCGT CAAATATCTG
GCGACGGCCG GCCCGCTCAC GTTCGAAGCG CACTACGCGT TCAGCAACGA ACCGGGCGCG
TTCCAGGCGA GCGCCGCGCA CGGCGCGGGC TTCGAGTACA CGGGCGGCGC GCTGTCGTTC
GCGTTCGCAT ACGACGACGT GCACACGCCG CAAGCCGGCG GCTTCGCGCA CTTGCGCCGC
TACGCGGCCG CCGCGATGCT GACCGTCGAG GCGACGCAAC TGATCGCGGG CGCCGCGCAC
GGGCAAGGCA ACGTCGCGAC GCCATCGGTC GTCACGCGCT ACACGTTCTG GTGGATCGGC
GTGCGTCAGG CGATCACGCC CGTCGTTCAA CTGATCGGCG CGCTGTATGC GGAGCGCGTG
CGCGCGCAAA ACCCGGCGAG CCCGCCCGCC GCGCGACATG CGTCGGGCAC GCCGCAGCAG
GCGACGCTGC AGTTGAACTA CTTCGTCTCG AAAACCACGA CGCTGTACGC GGCAACCGGT
TACGCGCGCC ACGCGGCGCT CGATTTCGAC AACTATAACT ACGGCTTCCT CCACTACTCG
CTCGCCGGCG CGCGCGCCGG CAGCGCGGGC GTCGCCGTCG GCGTGCGCAA GTTGTTCTGA
|
|---|
| Protein sequence | MDKRLSALCG LGLASAGACA QTSVTLYGVA DAYVEYATNQ ADAKGEPAAL ARMGSGGKSG
SRWGIKGTEV LGGGWRAAFR LESGVNLNNG AGTGAGGFDR SAWVGLEHPR WGALRFGRQY
TTMFDIMEHY SPTGAYSTLY EPDGAIVGIS FRENNVVKYL ATAGPLTFEA HYAFSNEPGA
FQASAAHGAG FEYTGGALSF AFAYDDVHTP QAGGFAHLRR YAAAAMLTVE ATQLIAGAAH
GQGNVATPSV VTRYTFWWIG VRQAITPVVQ LIGALYAERV RAQNPASPPA ARHASGTPQQ
ATLQLNYFVS KTTTLYAATG YARHAALDFD NYNYGFLHYS LAGARAGSAG VAVGVRKLF
|
|---|
| |