| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A2902 |
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| Symbol | oppB |
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| ID | 4904803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | - |
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| Start bp | 2834563 |
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| End bp | 2835501 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640146005 |
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| Product | oligopeptide ABC transporter, permease protein OppB |
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| Protein accession | YP_001076931 |
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| Protein GI | 126457043 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0918369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGCCT ACGCATTGCG GCGCACGCTA TGGGCGGTGC CGACGATCCT CGCCGTCGTC
ACGGTCTGCT ATCTGCTGCT GCATTTCACG CCCGGCGGGC CGTTCGACAG CGAGAAGCAG
CTGTCCGCCG CGACGCTCGC GAACCTGAAC GCGAAGTACC ACCTCGACGA GCCGCTGTGG
AAGCAGTACC TGCTGTATCT CGGCTCGCTG CTGCACGGCG ATCTCGGCCC CTCGTTCCGC
TATACGGACT GGTCCGTGAA CGATCTGGTG CGCAAGGCGT TTCCGGTGAG TCTGGGCGTC
GGCGGCGTGT CGATTCCGCT GTCGATCGTG CTCGGCGTGC TGCTTGGCAC GCTCGCCGCG
GTGCGCCGCG ACAGCTTCGT CGACCGCTTC GTGATGCTGA TCGGCAACTT CGGCAATGTG
ATTCCGCCGT TCGTGCTCGG CCCGGTGCTC GTGCTGATCT TCGCGATCGG GCTGAAGACG
TCCGAGGGCG CGGGCTGGCT GCCCGCGGGC GGCTGGGGCG ACGGCGGCTG GCGCTACCGT
GTGCTGCCCG TCACGCTGCT CACGCTGATC AACGTGTCGC TGCTCGCGCG CGTGATGCGC
GGCTCGATGA TCGAGACGCT GTCGAGCAAC TACATCCGCA CCGCGCGCGC GAAGGGGCTG
CCCGGCCGCA CGATCGTGCT GCGCCATGCG CTCAAGCCCG CGCTGATGCC CGTCGTGTCG
CTGTTCGGCA CGGTATGCAT CTCGTCGATC ACCGCGGCCG TCGTGACGGA ATCGGTGTTC
GCGCTGCCGG GCCTCGGCCA GCTCGTCGTC AACGGCGCGA TCAATCGCGA CTACACGCTC
GTGCTCGGTC TCGTCGTGCT GACGACCGTC TGCGCGGTGC TGTTCAACCT GCTGGTCGAT
CTCGCGTACG CGTGGCTCGA TCCGCGCATC CGCTATTGA
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| Protein sequence | MLAYALRRTL WAVPTILAVV TVCYLLLHFT PGGPFDSEKQ LSAATLANLN AKYHLDEPLW
KQYLLYLGSL LHGDLGPSFR YTDWSVNDLV RKAFPVSLGV GGVSIPLSIV LGVLLGTLAA
VRRDSFVDRF VMLIGNFGNV IPPFVLGPVL VLIFAIGLKT SEGAGWLPAG GWGDGGWRYR
VLPVTLLTLI NVSLLARVMR GSMIETLSSN YIRTARAKGL PGRTIVLRHA LKPALMPVVS
LFGTVCISSI TAAVVTESVF ALPGLGQLVV NGAINRDYTL VLGLVVLTTV CAVLFNLLVD
LAYAWLDPRI RY
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