| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A2901 |
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| Symbol | oppC |
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| ID | 4905369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | - |
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| Start bp | 2833649 |
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| End bp | 2834551 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640146004 |
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| Product | oligopeptide ABC transporter, permease protein OppC |
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| Protein accession | YP_001076930 |
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| Protein GI | 126455940 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00914111 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCCTG TTACCTCTTC GATCGAGCTG CCGACGGCGG CCGACGCGCC GCCGCGCTCG
CGCACGCCGC TCGGGCTTGC CGCGCGGCGC TTCGTGCGCA ACCGCGCGGC GCTCGCGAGC
CTCGCGGCGC TCGCGGTGAT CGCGCTCATG TGCTTCGTCG GGCCGCTGCT CCTGCCCAAC
GATCCGGCCG CGAGCGACTG GTCGTCGATC AGCCTCGCGC CGACGCTCGC CAACGCGCAT
TGGTTCGGCA CCGACGAGCT CGGCCGCGAT CTGCTCGTGC GCACGCTGAT CGGCGGGCGC
GTGTCGCTCG AAGTCGGCCT GCTCGGCACG TTCGTGTCGG GGCTGTTCGG CGTCGCGTGG
GGCGCGATCG CGGGCTTCGC CGGCGGCCGC GTCGACGCGG CGATGATGCG CGTCGTCGAC
ATGATGTATG CGATTCCGTA TCTGCTGATC GCGATCCTGA TGATGACGCT GTTCGGGCGT
TCGTTCATTC TCGTCGTGCT GACGATCAGT GCGTTCTCTT GGCTCGACAT GGCGCGCGTC
GTGCGCGGCC AGACGCTTTC GCTGCGCACG CGCGAGTTCG TCGATGCGGC GCGCGCGATC
GGCGTCACGC CGGCGGCGAT CGTGCGGCGC CACATCGTGC CGAATCTGCT CGGCGTGGTG
GTGGTCTACG CGACCGTCAG CGTGCCGGCG ATCGTGCTGA CCGAATCGGT GCTGTCGTTT
CTCGGGCTCG GCGTGCAGGA GCCGATGACG AGCTGGGGCG TGCTGATCCA GGACGGCGCG
CAGAAGCTCG AGGCGATGCC GTGGCTGCTG CTCGCGCCCG CCGTGATGCT GTGCGTGACG
CTCTACTGCG TGAACTTCGT CGGCGACGGC CTGCGCGACG CACTCGATCC GAAGGACCGC
TGA
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| Protein sequence | MTPVTSSIEL PTAADAPPRS RTPLGLAARR FVRNRAALAS LAALAVIALM CFVGPLLLPN
DPAASDWSSI SLAPTLANAH WFGTDELGRD LLVRTLIGGR VSLEVGLLGT FVSGLFGVAW
GAIAGFAGGR VDAAMMRVVD MMYAIPYLLI AILMMTLFGR SFILVVLTIS AFSWLDMARV
VRGQTLSLRT REFVDAARAI GVTPAAIVRR HIVPNLLGVV VVYATVSVPA IVLTESVLSF
LGLGVQEPMT SWGVLIQDGA QKLEAMPWLL LAPAVMLCVT LYCVNFVGDG LRDALDPKDR
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