| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A2898 |
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| Symbol | |
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| ID | 4903451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | - |
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| Start bp | 2829910 |
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| End bp | 2831493 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640146001 |
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| Product | OprD family outer membrane porin |
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| Protein accession | YP_001076927 |
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| Protein GI | 126455486 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.907391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTGGACGG CGCGAACGAT CTTCGCGCCG AGGGAAGACG CGTCGCTACG GCGGCGCGTC
GGGGTGTCGC CGGCCGCGAG GCGCGGCCGG CGAGTGGGTA GTCAACATAA AAAGAGAAGC
GCAATGACAC AACATCGATC GATGAAGAGG GTCGCGCGGG CGGTCGTGCT CGCGTGGGGA
CTGCCGATGC TCGCCGGCGT ATCGATTGCC GGCGCCGCGC GCGCGGACGA TGCGGCGCCC
GCCGCGCCGG CTCAGGCGCC GTTAGCCGCG ACGCTCGCGC AGCAGGCGAC GACGCCGAAC
GCGCTCGTCA ATGCCGACGC CACGCAGGCG GTGCTGCCGC AGCCGCCGAT GTCGAGCCAG
GCGAAATCGA AGGGCTTCAT TGCCGACAGC CATTTCGACG TGCTGTTGCG CAATTACGCG
GACGTGCTCG ATGCGAAGGG CGGCCCGCAT CGTCACGCGT GGGTCCAGGG CGTGATGGCG
AACTTCGAGT CCGGCTATAC GGGCGGGCTG ATCGGCTTCG GCGTGGACGC GTCGATCTAC
GCGGCGCTGA AGCTCGACGG CGGCGCGGGC GGCGGCAACA TGGTGCACGT CGCGAAGGGC
GGCGGCGGCT CGAACCAGCT CGCTTGGGCG TTCCCCGGCA TCTATGACGT GAAGGCGCGC
ATCTCGAACA CCGTGATCAA GTACGGCCTG CAGGCGGTCG ACAATCCGTT CATGGAGCAG
CACGACAACC GCGCGCTGCC GCCGACGTTC CTCGGCGCGA CGATCGTGAG CAACGAATTC
AAGAACGTGA TGCTCGAGGC GGGCAGCTTC ACGAAGACCA ACGCGCGCGG CCATACGACA
CTCACGAACC TGACGACGCA ATACGGCGGC ACGCGCGTCG ACCGCTTCAC GTACGTCGGC
GGCACGTGGG ATTATTCGCA GACGGGCTCG GCGTCGTTCT ACGCGGGCCA GGCCGACGAT
GTCTGGCGCC AGTACTACGG CTCGGTCAAG CAAAGCTACG GCTCGCCGCA GACGGTCAAG
TGGACGGGCT TCGGCAATTT CTATTCGACG CACGACACGG GCGACGCGCG CCAGGGCAAG
ATCGACAACA ACGCGTACAG CCTGTCGCTC GCCGCGCAGC ACGGCCCGCA CGAGCTGCTG
CTCGGCTATC AGCAGGTGCT CGGCGACCAG TTCTTCGATT ACCTGAACGA AACGAACGGC
ATCTTCCTCG TCGATTCGAT GGACGTCGAC TACAACGCGC CGCACGAGAA ATCGCTGCAA
CTGCGCTACA CGTTCTACGG CAAGGAGGCG GGCCTGCCCG GCTTCAAGGC GATGGTGTGG
GGCGTGACAG GCTGGGGGGC GGACGGCTCC GCGAGCGCGG CGCTCGATCC GACGCGCTCG
AGCATCTACT GGAAGGACGG CGCGCCGGTG CAGGGCCGCC ATCACGAGTT CGGCTTCATC
CCGTCGTATA CGATCCAGAG CGGCAAGCTC AAGGACACGA AGATCACGTT CATCGCGATG
TGGCACGTGG GTTCGGCGCA CTACTCGGAC AGTACCAACC AGGAATACCG GCTGGTCGTG
AACGTGCCGG TGAAGGTGTT CTAA
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| Protein sequence | MWTARTIFAP REDASLRRRV GVSPAARRGR RVGSQHKKRS AMTQHRSMKR VARAVVLAWG
LPMLAGVSIA GAARADDAAP AAPAQAPLAA TLAQQATTPN ALVNADATQA VLPQPPMSSQ
AKSKGFIADS HFDVLLRNYA DVLDAKGGPH RHAWVQGVMA NFESGYTGGL IGFGVDASIY
AALKLDGGAG GGNMVHVAKG GGGSNQLAWA FPGIYDVKAR ISNTVIKYGL QAVDNPFMEQ
HDNRALPPTF LGATIVSNEF KNVMLEAGSF TKTNARGHTT LTNLTTQYGG TRVDRFTYVG
GTWDYSQTGS ASFYAGQADD VWRQYYGSVK QSYGSPQTVK WTGFGNFYST HDTGDARQGK
IDNNAYSLSL AAQHGPHELL LGYQQVLGDQ FFDYLNETNG IFLVDSMDVD YNAPHEKSLQ
LRYTFYGKEA GLPGFKAMVW GVTGWGADGS ASAALDPTRS SIYWKDGAPV QGRHHEFGFI
PSYTIQSGKL KDTKITFIAM WHVGSAHYSD STNQEYRLVV NVPVKVF
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