Gene BURPS1106A_A2889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_A2889 
Symbol 
ID4906050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009078 
Strand
Start bp2824600 
End bp2826138 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content69% 
IMG OID640145993 
Productsigma-54 dependent transcriptional regulator 
Protein accessionYP_001076919 
Protein GI126458526 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACAAGA AAGAAAAAGT GGAGACGAAT GCATCGATTT CGGGCGGCTG GGTTCGGCTG 
CCCGCCGATT ACGGCGACGT GCTGCGGCGC GCGGCGGAGT CGCTGTTCAA GACCTTCGAG
CACTCGAGCG TCGGCACGCT GATCGTCGAC AAGGATGCGC GCGTCGTCTG GATCAATCAG
CGTTACGCGG CGCGTTTCGG GTTCGCCGAT CCGCAGCAGG CGATCGGCCG CGATTGCGAA
GCGGTGATTC CGCACAGCCT GATGCGCGAG GTGGTCGCGA CCGGCCGCCC GATCCTGCTC
GACATCATGG AGACGGGCCG CGAGCCGCTC GTCGTCACGC GCCTGCCGCT GACGGACGAC
GCGGGCGAGA CCGTCGGCGC GATCGGCTTC GCGCTGTTCG ACGAGCTGAA GACGCTCACG
CCGCTCTTTT CGCGCTACAT GCAGGTCCAG CAGGAGCTGA TCGCGACGCA ACGCTCGCTC
GCGCAGGCGC GGCGGGCGAA ATACACGTTC GCGAGCTTCG TCGGCACGAG CGCGGTGAGC
CTCGAGACGA AGCGGCAGGG GCGGCGCGCC GCGCAGGTCG ATTCGCCGGT GCTGCTGCTC
GGCGAGACGG GCACCGGTAA GGAGCTGCTC GCGCATGCGA TCCACGCGGC GTCCGCGCGG
GCATTGAAGC CGCTCGTGAC CGTCAACGTC GCGGCGATTC CCGATGCGCT GCTCGAAACC
GAGTTCTTCG GCGCGGCGCC GGGCGCGTAC ACGGGCGCGG ATCGCAAGGG GCGCGTCGGC
AAGTTCGAGC TTGCCGACGG CGGCACGCTC TTTCTCGACG AAATCGGCGA CATGCCGGTG
CCGCTGCAGG GCAAGCTGCT GCGCGTGCTG CAGGACAAGG AGTTCGAGCC GGTCGGCTCG
AACCGGATCG TGCGCGCGAA TGTGCGGATC ATCGCGGCGA CGTCGGCCGA ATTGCCGGCG
CTCGTCGCGG AAGGGCGCTT TCGCGCGGAC CTTTATTACC GGCTGAACGT GCTGACGATC
CATGCGCCGC CGCTGCGCGA GCGCGCATCG GACATCGAGG CGCTCGTCTA CACGATGCTC
GAGGAACTCG CCGCGCAGCA TGGGCTGGCC GAGCACTGCG AACTGACCGA CGACGCGCTG
CGCCTGCTGT GCGCGTATCC GTGGCCCGGC AACGTGCGCG AACTGCGCAA CACGCTCGAG
CGCGCGCTGA TGCTGTCCGA TCGCGCGTTG ATCGATGCGC GCGCGCTCGC GCCGTTCATC
GGGCCGGCGC GCGGCGCGGG GGGCGGTGTC GGGGCGGGCG GTGGGGCGGG GGCGGGCGGC
GTCGGTCCGG CTGCGGTCGC CGTCGCGGCG CAGACTGCCA TGGCCGATAC GCGCGCGGCG
GCGTCATCCT ATGCGGACGC ATTCGCCGCG TGGGAGCGTC AATTCCTGAT CGACGCGCTT
GCCGCGTCCA ACGGCAAGGT GACGGAAGCG GCCGCGCGCA TCGGCATCGG GCGTGCGACG
TTCTACAAGA AGCTCGCGAC GCTCGGCATC GATACGTAG
 
Protein sequence
MDKKEKVETN ASISGGWVRL PADYGDVLRR AAESLFKTFE HSSVGTLIVD KDARVVWINQ 
RYAARFGFAD PQQAIGRDCE AVIPHSLMRE VVATGRPILL DIMETGREPL VVTRLPLTDD
AGETVGAIGF ALFDELKTLT PLFSRYMQVQ QELIATQRSL AQARRAKYTF ASFVGTSAVS
LETKRQGRRA AQVDSPVLLL GETGTGKELL AHAIHAASAR ALKPLVTVNV AAIPDALLET
EFFGAAPGAY TGADRKGRVG KFELADGGTL FLDEIGDMPV PLQGKLLRVL QDKEFEPVGS
NRIVRANVRI IAATSAELPA LVAEGRFRAD LYYRLNVLTI HAPPLRERAS DIEALVYTML
EELAAQHGLA EHCELTDDAL RLLCAYPWPG NVRELRNTLE RALMLSDRAL IDARALAPFI
GPARGAGGGV GAGGGAGAGG VGPAAVAVAA QTAMADTRAA ASSYADAFAA WERQFLIDAL
AASNGKVTEA AARIGIGRAT FYKKLATLGI DT