| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A2864 |
|---|
| Symbol | |
|---|
| ID | 4905068 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | + |
|---|
| Start bp | 2805898 |
|---|
| End bp | 2807139 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640145967 |
|---|
| Product | major facilitator family transporter |
|---|
| Protein accession | YP_001076893 |
|---|
| Protein GI | 126455534 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAAT CCACCATGCC GGCCGGCGGC GTCGCGATCC GGCTTGGTCT CAAGGAAAAC
TGGCGCCAGT TCGCACTACT CGTGCTGATC AATGCGTTCG TGGGTGGCAT GGTGGGGATC
GAGCGGACGG TCGTGCCGCT GATCGGCTCC GAGACGTTTC ACATCCAGTC CACGACGCTC
ATTACATCGT TCATCGTCAG CTTCGGGCTG GTGAAAGCCG TGGCGAACCT GATTTCCGGT
CAACTGGCGG ACACCTGGGG CCGCAAGCGC GTGCTTGTGG CCGGCTGGCT GCTCGGGTTG
CCGGTGCCGT TCATGATCAT CGCCGCGCCG AACTGGGAAT GGGTGATCGC GGCCAATGTG
TTGCTGGGCC TCAGCCAGGG TTTTGCGTGG TCGATGACCG TGATCATGAA AGTGGATCTC
GTGGGGCCGA AGGCGCGCGG GCTCGCGGTC GGGCTCAACG AGTTCGCGGG CTATTTCGCG
GTGGGCCTGA CCGCGTTTCT GACCGGCTAC CTGGCGAGCC GCCACGGCCT GCGGCCGGCG
CCGATCTATC TCGGCGTCGC GTATGCGATC GCCGGCCTGA CCCTGTCGAT TCTCGTCGTG
CGCGATACGC GCGATCACGT TTGCCTGGAG GCCGGCAAGC CGAAAGAAGC AACGTCGCTG
TCGTTCCACG ACGTGTTCCT GCTCGCGTCG CTGAAGGACC GCAACCTGTT CGCGGCGTCG
CAGGCCGGGC TAATCAACAA CCTGAACGAC GGGATGAGTT GGGGCATCTT CCCGCTGTTT
TTCACGGGAC TCGGGCTCGG CGTCGAACGG ATCGGCATCC TCAAGGCCGC CTATCCGATC
GTGTGGGGCG TGTTTCAGGT CGTCACCGGC CCGTTGAGCG ACCGCTGGGG CCGCAAGGGG
CTGATCGTCG CCGGGATGTG GGTTCAGGCG GCCGGCCTGG TGCTGACCGC GTCGATGGGC
GAGTTCCGGT GGTGGCTGGT TGCCAGCGTG CTGCTCGGCC TCGGCACCGC GATGGTCTAC
CCGAGCCTGA TCGCGGCCGT CTCCGATGCG TCGGATCCGC GCTGGCGTGC CCGGGCGCTG
AGCGTGTACC GGTTCTGGCG TGACCTCGGC TATGCGATCG GCGCGCTGTC GGCGGGTCTC
ATCGCGGACC GCTTCGGCTT CGCCGATGCG ATCCTGTCGA TCGCGGCCGT CACGTTCCTG
TCAGGCGCCG TGGTGGCGAT CGTCATGCAC GCGCGCCACT GA
|
|---|
| Protein sequence | MSKSTMPAGG VAIRLGLKEN WRQFALLVLI NAFVGGMVGI ERTVVPLIGS ETFHIQSTTL
ITSFIVSFGL VKAVANLISG QLADTWGRKR VLVAGWLLGL PVPFMIIAAP NWEWVIAANV
LLGLSQGFAW SMTVIMKVDL VGPKARGLAV GLNEFAGYFA VGLTAFLTGY LASRHGLRPA
PIYLGVAYAI AGLTLSILVV RDTRDHVCLE AGKPKEATSL SFHDVFLLAS LKDRNLFAAS
QAGLINNLND GMSWGIFPLF FTGLGLGVER IGILKAAYPI VWGVFQVVTG PLSDRWGRKG
LIVAGMWVQA AGLVLTASMG EFRWWLVASV LLGLGTAMVY PSLIAAVSDA SDPRWRARAL
SVYRFWRDLG YAIGALSAGL IADRFGFADA ILSIAAVTFL SGAVVAIVMH ARH
|
|---|
| |