| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A2678 |
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| Symbol | |
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| ID | 4904101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | + |
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| Start bp | 2615064 |
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| End bp | 2616527 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640145781 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001076708 |
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| Protein GI | 126457290 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCCGA CGAGCGTAAT CGTTTGCGGC ATGCTGCTGC TCACGCTGAT CTGGCTGTTT
TGCGCACGCG TGCTGTACCA GTCGCACCGG GACGCATACC TGCATGCGGT CGACAACGCA
CACAATCTCG TGCTGCTGCT CGAACGCGAC ATCGCGCGCA ACGTCGAGCT CTACGACCTG
TCGCTGCAGG CGGTCGTCGA CGGCGTGAAC GATCCGCGCA TCATGGCGCT CGATCCCGCG
ATACGCGCCA AGGTGCTGTT CGACCGCGCG GCCACCGGCA AGTACCTCGG CACGATCTCC
GTGATGAACG AGCACGGCGA CATCGTGCTC GACTCGCACT TCCCGCATCC GCCTGCCGTC
GCGAACTTCT CGTATCGCGA CTATTTCGTC TACCAGCGCG ATCACCCGAA AGGCGGCCTC
TACATCGGCG AGCCGTACGC GGCGCGGCTG CGCCACGGCG CGCCGACGAT CGCGCTCAGC
CGGCGCATCA CGCGCGCCGA CGGCTCGTTC GGCGGCGTCG TCGTCGGCAC GCTCGGCATC
GACTACTTCC GCTCGCTGCT CGACGGCCTT TCGGTGGGCC CGGACGGCAC GGCGGCCGTC
TTCGAGACCA ACGGGCTGAT GATCACGCGC CTGCCGTTCG ATCCGAAGAT GGTCGGACGC
AGCATCGCCG ACTCGGCCCT CTACGCGCAC GTGCGCGAGC ACGACGCGGG CGTGTTCACC
GGCGTCGCGT CGATCGATGG CGTGCGGCGG CTTTACGTGT ACAAGCGGCT GCAGGGGCTG
CCGATCGTCG TCAACGTGTC GCCCGCCGAG CGGCACGTCT TCATGCAGTG GCGCATTCGG
GCGCAGCGGC TCGGCGTGCT GATGCTCGTG TTCGGCATCG CGATCGTCGG CGGCACCGCG
CTGCTCGCGC GCGAGTTGCG CTGGCGGCGG CACGCGGAGA TGCGCCTGCA GCGCCTCGCC
CGCACCGATG CGCTGACGGG CCTCGGCAAT CGGCGCGCGT TCGACGAGAA CCTGCGCAGC
GAATGGGCGC GCGCGCTGCG CACCGGCCGC CCGCTGTCGC TGCTGTTCGT CGACATCGAT
CAGTTCAAGG ACTACAACGA CCACTACGGC CACCAGGCGG GCGACGACGT GCTGCGCGAA
GTCGGCGGCT GCCTCGCGGT GAACGTACGC CGCGCGGCCG ACGACGTCGC GCGTTACGGC
GGCGAGGAGT TCGTGATCAC GCTGCCGGAC ACCGACGCGA AAAGCGCGGC CGCGATCGCC
GAGTACATCC GTCGCGCGGT CTACGATCTC GACATCGAGC ACGTGCGCAG CCCGTATGCG
CGCGTGACCG TCAGCATCGG CCTCGTCACG TCGCACGAGC ACATCGCGCA CTCGGACGCG
ACGCTCGTGA AGATGGCCGA TGCCGCGCTG TACCAGGCGA AATCGACCGG ACGCAACCGC
GTCTGCGGCG CGCAGCACGC CTGA
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| Protein sequence | MSPTSVIVCG MLLLTLIWLF CARVLYQSHR DAYLHAVDNA HNLVLLLERD IARNVELYDL
SLQAVVDGVN DPRIMALDPA IRAKVLFDRA ATGKYLGTIS VMNEHGDIVL DSHFPHPPAV
ANFSYRDYFV YQRDHPKGGL YIGEPYAARL RHGAPTIALS RRITRADGSF GGVVVGTLGI
DYFRSLLDGL SVGPDGTAAV FETNGLMITR LPFDPKMVGR SIADSALYAH VREHDAGVFT
GVASIDGVRR LYVYKRLQGL PIVVNVSPAE RHVFMQWRIR AQRLGVLMLV FGIAIVGGTA
LLARELRWRR HAEMRLQRLA RTDALTGLGN RRAFDENLRS EWARALRTGR PLSLLFVDID
QFKDYNDHYG HQAGDDVLRE VGGCLAVNVR RAADDVARYG GEEFVITLPD TDAKSAAAIA
EYIRRAVYDL DIEHVRSPYA RVTVSIGLVT SHEHIAHSDA TLVKMADAAL YQAKSTGRNR
VCGAQHA
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