Gene BURPS1106A_A2654 details

Gene Information

• Locus tag: BURPS1106A_A2654
• Symbol: phbC
• ID: 4906377
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009078
• Strand: +
• Start bp: 2593062
• End bp: 2594990
• Gene Length: 1929 bp
• Protein Length: 642 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 640145757
• Product: poly-beta-hydroxybutyrate polymerase
• Protein accession: YP_001076684
• Protein GI: 126457587
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG3243] Poly(3-hydroxyalkanoate) synthetase
• TIGRFAM ID: [TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.943574
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATCGTCG ACGCATGCGA TCGAAGCGCG CGGGGAGCGG CGACGCCCGC GTCGCGGCTT 
CGCGCACGGC CGGCCGCATC GGCTGCCGTG CCTCGTCATG CGCTCGCCCG CGCAGCGCCA 
GCCGAAGGAA GCCCGATGGA TACACGCCAC GCCCCCGAAT CCGGCGCGCC CGACGCGCCG 
CTGCCCGCCC ACCCGCCCGC GTCCTATGCG CCGGAAAGCC CCTACCGCAT CTTCGATCTC 
GCGAAGGAAG CGTCGGTCGC GAAGCTGACG TCGGGCCTGT CGCCCGCATC GTTGCAGCTC 
GCGCTAGCGG ACTGGCTGAT TCACCTCGCC GCCGCGCCCG GCAAGCGCGC GGAGCTCGCG 
ACGCTCGCGC TCCGGCACGC GGCGCTGCTC GGCCAATACC TGCTCGAGGC GGCGACCGGG 
CGCACACCCG CCGCGCCCGC GCAGCCGTCG CCGGGCGACC GGCGCTTTCG CGCAGGCGCG 
TGGCAGCTCG AGCCCTACCG CTTCTGGCAC CAGTCGTTCC TGCTCGCCGA GCAGTGGTGG 
CGCGCGGCGA CCCGCGACGT GCCCGGCGTA TCGCCGCATC ACGAGGACGT CGTCGCGTTC 
TCCGCGCGGC AGATGCTCGA CACGTTCGCG CCGGCGAACT ATGTCGCGAC GAACCCCGAA 
ATCGCGCAGC GCACCGCGCT CACGGGCGGC GCGAACCTCG CGCAGGGCGT GTGGAACTAT 
CTGGACGACG TCCGCCGCCT GATCACGAAG CAGCCGCCCG CGGGCGCCGA GCAGTTCGAG 
CTCGGCCGGA ATCTCGCGAC GACGCCCGGC CGCGTCGTGT TCCGCAATCA CCTGATCGAG 
CTGCTGCAGT ACAGCCCGAC GACGCCCGAC GTCTACGCGC AGCCCGTGCT GATCGTGCCC 
GCATGGATCA TGAAGTACTA CATCCTCGAT CTGTCGGCGC ACAACTCGCT CATCCGCTAC 
CTGGTCGGCG AAGGGCACAC GGTGTTCTGC ATCTCGTGGC GCAACGTCGA TGCGAGCGAC 
CGCGACCTGA GCCTCGACGA CTACCGCAAG CTCGGCGTGA TGGACGCGCT CGACACGATC 
GGCGCGATCG TGCCCGGCGA GAAGATCCAC GCGACCGGCT ACTGCCTCGG CGGCACGCTG 
CTCTCGATCG CGGCGGCCGC GATGGCGAAC ACGGGCGACG ATCGCCTCGC GTCGATCACG 
CTGCTCGCCG CGCAAACGGA TTTCGCCGAG CCCGGCGAGC TCCAGTTGTT CATCGACGAC 
AGCGAGATCC ACTTCCTCGA GAGCATGATG TGGGAGCGCG GCTATCTCGG CGCGCACCAG 
ATGGCGGGCT CGTTCCAGTT GCTGATGTCG AACGATCTGA TCTGGTCGCG CGTGATCCAC 
GACTATCTGC TCGGCGAGCG CACGCCGATG ATCGACCTGA TGGCGTGGAA CGCCGATTCG 
ACGCGGATGC CTTACCGGAT GCATTCCGAG TATCTGCGCC ACCTGTTCCT CGATAACGAC 
CTCGCGACGA ACCGCTATGT GATCGACGGG CAGACGGTGT CGGTGCACAA CATCCGCGCA 
CCGTTCTTCG TCGTCGGCAC CGAGCACGAC CATATCGCGC CGTGGCGCTC CGTCTACAAG 
ATCCACTACC TGAGCGGCAG CGACGTGACG TTCGTGCTGA CGGCGGGCGG CCATAACGCG 
GGCATCGTCA GCGAGCCCGG CCATGCGAAG CGCCATTACC GGATGAAGAT GACGGCCGCC 
GCCGCGCCGA GCATCTCGCC CGACGAATGG CTTGCCGGCG CGACCGATTT CGAAGGCTCG 
TGGTGGCCCG CGTGGCACGC ATGGCTCGCC CGGCATTCGA GCCCGCAGCG CGTCGCGCCG 
CCGCCGCTCG GCAAGCCGGG CGCGCACACG CTCGGCGACG CGCCGGGCAC CTATGTGTTC 
CAGAAATAA 

 

Protein sequence

MIVDACDRSA RGAATPASRL RARPAASAAV PRHALARAAP AEGSPMDTRH APESGAPDAP 
LPAHPPASYA PESPYRIFDL AKEASVAKLT SGLSPASLQL ALADWLIHLA AAPGKRAELA 
TLALRHAALL GQYLLEAATG RTPAAPAQPS PGDRRFRAGA WQLEPYRFWH QSFLLAEQWW 
RAATRDVPGV SPHHEDVVAF SARQMLDTFA PANYVATNPE IAQRTALTGG ANLAQGVWNY 
LDDVRRLITK QPPAGAEQFE LGRNLATTPG RVVFRNHLIE LLQYSPTTPD VYAQPVLIVP 
AWIMKYYILD LSAHNSLIRY LVGEGHTVFC ISWRNVDASD RDLSLDDYRK LGVMDALDTI 
GAIVPGEKIH ATGYCLGGTL LSIAAAAMAN TGDDRLASIT LLAAQTDFAE PGELQLFIDD 
SEIHFLESMM WERGYLGAHQ MAGSFQLLMS NDLIWSRVIH DYLLGERTPM IDLMAWNADS 
TRMPYRMHSE YLRHLFLDND LATNRYVIDG QTVSVHNIRA PFFVVGTEHD HIAPWRSVYK 
IHYLSGSDVT FVLTAGGHNA GIVSEPGHAK RHYRMKMTAA AAPSISPDEW LAGATDFEGS 
WWPAWHAWLA RHSSPQRVAP PPLGKPGAHT LGDAPGTYVF QK