| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A2536 |
|---|
| Symbol | dehII |
|---|
| ID | 4904916 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | - |
|---|
| Start bp | 2493464 |
|---|
| End bp | 2494498 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640145639 |
|---|
| Product | haloacid dehalogenase, type II |
|---|
| Protein accession | YP_001076566 |
|---|
| Protein GI | 126456413 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
|---|
| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.762748 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTGCTTGC GTGCCCGTGC GCTCGTGCGC GATGAAGCCG GCCTCTATTT CTCGCCGGGC
ATGCAGGCAG GCGGTTCGCC GATAATGTCG GACGGCAGAG GTGCGTTTCT TTCGGACGTG
CAGGCGCGGC GGTCCGCGCG TGGCGGATCG TACGGGGCGG TCCTGCGTGC GTCGCCCAGG
CGCGCGCCGC CGGCCGGCGC GCGGCTCGCC GCGGCGTTCG GCCGGGCGCG CGCGTTCGGC
GTCGGGCCGG TGCGAGCCGC CGACGGCGGC CGCTGCATCC TGAAACGTCA TCCCACGACT
CAGGAGAACA TCATGCAGAC GCTTGGCGTG AAGGCATTGG TATTCGACGT GTTCGGCACC
GTGGTCGACT GGCGTTCCGG CGTCATTCGC GACGCGACGC CGTTCCTCGC GAAGTACGGC
GGCGCGGGAG CCGATCCGGC CGCGTTCGCG GATGCGTGGC GCGCGGGCTA TTCGCCCGCG
ATGGAGGAGG TGCGCAGCGG CCGCCGGCCG TTCACGCGGC TCGACGTGCT GCACCGGGAG
AATCTCGACG CGCTGCTGCC CGCGTTCGGC ATCGATCGCG CGAGCGTGGC CGACGCCGAT
CTCGACGCGC TGAACCTCGC ATGGCACCGG CTCGATCCGT GGCCCGATTC GGTCGCGGGG
CTCACGCGGC TGAAGGCGCA TTACATCATC GCGCCGCTGT CGAACGGCAA CGTGATCCTG
ATGATCGACA TGGCCAAGCG CGCGGGGCTG CCGTGGGACG CGATCCTCGG CGCCGAAGTG
GCGCAGGCGT ACAAGCCGAC GCCCGAAGCG TACCTGCGCA CGGCCGATAT CCTCGCGCTG
CGTCCGGATG AGGTGTGCCT CGTCGCCGCG CACAACGGCG ACCTCGCGGC CGCGCGGCGC
TGCGGCTATC GCACCGCGTT CGTCGCGCGA GCGCGCGAGC ATGGTCCCGC GCAGACCACC
GATCTGCGCG CGGAGCAGGA TTGGGACGTC GTCGCGGCCG ATTTCATCGA GCTCGCGCAG
CGCTTCGGCG CGTGA
|
|---|
| Protein sequence | MCLRARALVR DEAGLYFSPG MQAGGSPIMS DGRGAFLSDV QARRSARGGS YGAVLRASPR
RAPPAGARLA AAFGRARAFG VGPVRAADGG RCILKRHPTT QENIMQTLGV KALVFDVFGT
VVDWRSGVIR DATPFLAKYG GAGADPAAFA DAWRAGYSPA MEEVRSGRRP FTRLDVLHRE
NLDALLPAFG IDRASVADAD LDALNLAWHR LDPWPDSVAG LTRLKAHYII APLSNGNVIL
MIDMAKRAGL PWDAILGAEV AQAYKPTPEA YLRTADILAL RPDEVCLVAA HNGDLAAARR
CGYRTAFVAR AREHGPAQTT DLRAEQDWDV VAADFIELAQ RFGA
|
|---|
| |