| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A2533 |
|---|
| Symbol | |
|---|
| ID | 4905544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | + |
|---|
| Start bp | 2490672 |
|---|
| End bp | 2491616 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640145636 |
|---|
| Product | protease family protein |
|---|
| Protein accession | YP_001076563 |
|---|
| Protein GI | 126456131 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1266] Predicted metal-dependent membrane protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAGATG TGAACAGAAC CGGCTGGCCG CCCCGTTTAC CGCCGCGGCT CAAACGCATC
TGGTACGGTG CGGGCGGCCT GCGCGCCGGC TGGGCCGTGC TGCTTTACGC GGCGATCGTC
GCGGCGATCC TGCTTGCGCT CGGCGCCGCC GCGCGCATCG CGCATCATCC GTTCCGGCCG
CGCGGCGATC TGAGCACGGC CGGCCAGATG CCGTTCGAGC TCGCGCTGTG CGCGGCCGCG
CTGATCGCCA CGCACGTGAT GAGCCGCCTC GATCGCCGCT CGTGGCTCGA TTACGGCCTG
CGCGCGCGGC GCGCCGCGTT GCATTTCGGA TGGGGCGCGT TCTGCAGCCT CGCCGCCGTG
TCGGCGATCA TGGGCCTGCT CGTCGCCACC GGCGGCGCGA CGATCGAATA CTCGGGCGCG
AACCGCGCGG CTGCGTTCGA ATCGGCCGTC ACCTGGGCGT GCGCGTTCGT GCTCGTCGCG
CTCGCGGAGG AAATCGCGTT TCGCGGCTAT GCGTTCTTCA AGCTCGCGCA GCGCACCCAC
CCCGTCGTCG CGGCGGCGCT CACGTCGCTC GCGTTCGGCC TCTCGCACGT GTCGAACCGC
AACGAGAACA TCGCGGGCAT CGTGCCCGTC GTGATCTACG GGCTCGTCGC ATGCCTCGCG
ATCTGGCGCA CCGGCTCGCT GTGGTGGGCG CTCGGCGAGC ACGCGATGTG GGACTGGAGC
GAATCGTTCC TGTTCGGCGC GGCCGACAGC GGGCTTACCG CGCACGACAC GCTGTTCAAG
AGCCATGCGA TCGGCCCCGT GTGGCTGAGC GGCGGCACGG TCGGCCCCGA GGCGAGCGTG
CTCGTGTTTC CGGCGCTCGC GGCGCTCGCG TACGTCGCCT GGCGCCTGCC GTCGCGCATG
GTGAGCGGCC CGCCGCTCGC GCGCGGACGC CGGCAGGCGG CGTGA
|
|---|
| Protein sequence | MGDVNRTGWP PRLPPRLKRI WYGAGGLRAG WAVLLYAAIV AAILLALGAA ARIAHHPFRP
RGDLSTAGQM PFELALCAAA LIATHVMSRL DRRSWLDYGL RARRAALHFG WGAFCSLAAV
SAIMGLLVAT GGATIEYSGA NRAAAFESAV TWACAFVLVA LAEEIAFRGY AFFKLAQRTH
PVVAAALTSL AFGLSHVSNR NENIAGIVPV VIYGLVACLA IWRTGSLWWA LGEHAMWDWS
ESFLFGAADS GLTAHDTLFK SHAIGPVWLS GGTVGPEASV LVFPALAALA YVAWRLPSRM
VSGPPLARGR RQAA
|
|---|
| |