| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A2505 |
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| Symbol | |
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| ID | 4903842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | - |
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| Start bp | 2466600 |
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| End bp | 2468696 |
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| Gene Length | 2097 bp |
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| Protein Length | 698 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640145609 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001076536 |
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| Protein GI | 126456623 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.351153 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGACC ACCGACGTAT CGCGCCGCCT TTCGCTCGCA GGCTGCATCC CTTGTCGCTG
CTGCTCGCCG CGAGCCTCGC GCATGGCGAG ACGGGCGCGC CGCCCGCCGA GCGCCGATCG
GACGCGCCGC CCGCGACGGC GCTCGCGCCG ATCTTCGTGA CCGCGAACCC GCTCGGCGCG
TCGGCGCTGA GCTCGCCCAC CGCGTCGCTG TCCGGCGACG CGCTGACGCT GCACCGCACC
GATTCGCTCG GCGACACGCT GAACGGCCTG CCCGGCGTGT CCACGACGAC CTATGGCCCG
CTCGTCGGCC GTCCGATCAT CCGCGGGATG GACGGCGATC GCATCCGCCT CCTGCAGAAC
GGCGTCGCCG CGTACGACGC GTCGTCGCTG TCCTACGATC ACGCGGTGCC GCAGGATCCG
CTGAGCGTCG AGCGCATCGA GATCGTGCGC GGGCCGGCGG CGTTGCTGTA CGGCGGCAAC
GCGGTCGGCG GCGTCGTCAA CACGATCGAC AACCGGATTC CGCGCGAAGC GATCACGGGC
GTCTCGGGCG CGCTCGACGC GAGCTACGGC GGCGCGAACA ATGCGCGTGC GGGCGCGGCG
CTCGTCGAAG GCGGCAACGG CCGCTTCGCG TTTCATCTCG ACGCGTTCGG CCGCGAGACC
GACGCGCTGC GGATTCCGGG CCATGCGCAT TCGGCGCGCC AGCGCGCGCT CGACGGCGAG
GACGCCAGCG AGCCGTACGG CAGGCTGCCG AACAGCGACG GCCGCCGTTA CGGCGGCGCG
GCGGGCGGCT CGTACACGTG GGCGGACGGC TACGTCGGCG CATCGTACAG CGGCTACGAA
TCGAACTACG GCTCCGTCGC CGAAACCGAC GCGCGGCTTC AGATGCGGCA GGAGCGCGTC
GCGCTCGCGT CGGAGGTGCG CAATCTGCGC GGGCCGTTCT CGCAGCTGAA ATTCGACTTC
GGCTACACGA ATTACCAGCA TAAGGAAATC GAGGACGGCG TGACGGGCAC GACGTTTCGC
AATCACGGCT ACGAGGCGCG CGTCGAGGCG CGGCACCGCA AGCTCGGCCC GTTCGAAGGC
GCGCTCGGCG TGCAGGTCGG ACAGAACACG TTCTCCGCGC TCGGCGGCGA GGCGCTCGCG
CCTACCACGC GCACGACGAG CGTCGCGCTG TTCGGCCTCG AGCAGTGGCA GGCGACCGAC
GCGCTGAAGC TGTCCGCCGG CGCGCGCATC GAGCACGTGC GGCTCGATCC GAGCGCGAAC
GGCGACGACA AGTTCGGCTT CGCGCGCTCG CGCGATTTCA ATGCGGGCAG CGTGTCGGCG
GGCGCGCTGT ATCAGCTCGC GCCCGCGTGG TCGCTCGCGG GCAACGTGTC GTACACGGAG
CGCGCGCCGA CCTTCTACGA GCTGTACGCG AACGGCCCGC ACGGCGCGAC GGGGCAGTAC
CTGATCGGCC GGCCCGATGC GCAGAAGGAG AAGGCGGTGT CGACCGATCT CGCGCTGCGC
TATGCGAGCG GTCCGAACCG CGGCAGCATC GGCGTGTTCT ACAGCCGCCT GCGGAACTAC
CTCGCCGAAT ACGACACCGG ACGGCTCGTC GACGACGACG GCGTGCCCGT GGCCCCGGGC
GCCGACGACG CGCTGCGCGA GGCCGTCTAT CGCGGCGTGC GCGCGGAGTT CTACGGCGTC
GAGCTCGAAG GCAGGTGGCG CGCGTTCGAG CGGCGCGGGC ATCGCGTCGA TCTCGAGCTG
AGCGCCGACT ACACGCACGC GCGCAACGCG GACACGGGCG AGCCGCTGCC GCGGATCGCG
CCGCTGCGCG CGACGCTCGC GGCCGATTAC GGCTACGGCC CGTTCGGTGC GCGCGCGCAG
CTCACGCATG CGTGGGCGCA GCATCGCGTG CCCGAGCACG ATCTCGCGAC CGACGGCTAC
ACGTCGCTCG GCGTCGTGCT CACCTACAAG TTGCGCGTCG GCGCGACGAA CTGGCTCGCC
TATCTGCGCG GCGACAACCT GACGAACCAG GACATCCGCT ACGCGAGCTC GGTGGTGCGC
AACATCGCGC CGCAGGGCGG GCGCAGCGTG AGCATCGGGA TGCGCACGAC ATTCTGA
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| Protein sequence | MDDHRRIAPP FARRLHPLSL LLAASLAHGE TGAPPAERRS DAPPATALAP IFVTANPLGA
SALSSPTASL SGDALTLHRT DSLGDTLNGL PGVSTTTYGP LVGRPIIRGM DGDRIRLLQN
GVAAYDASSL SYDHAVPQDP LSVERIEIVR GPAALLYGGN AVGGVVNTID NRIPREAITG
VSGALDASYG GANNARAGAA LVEGGNGRFA FHLDAFGRET DALRIPGHAH SARQRALDGE
DASEPYGRLP NSDGRRYGGA AGGSYTWADG YVGASYSGYE SNYGSVAETD ARLQMRQERV
ALASEVRNLR GPFSQLKFDF GYTNYQHKEI EDGVTGTTFR NHGYEARVEA RHRKLGPFEG
ALGVQVGQNT FSALGGEALA PTTRTTSVAL FGLEQWQATD ALKLSAGARI EHVRLDPSAN
GDDKFGFARS RDFNAGSVSA GALYQLAPAW SLAGNVSYTE RAPTFYELYA NGPHGATGQY
LIGRPDAQKE KAVSTDLALR YASGPNRGSI GVFYSRLRNY LAEYDTGRLV DDDGVPVAPG
ADDALREAVY RGVRAEFYGV ELEGRWRAFE RRGHRVDLEL SADYTHARNA DTGEPLPRIA
PLRATLAADY GYGPFGARAQ LTHAWAQHRV PEHDLATDGY TSLGVVLTYK LRVGATNWLA
YLRGDNLTNQ DIRYASSVVR NIAPQGGRSV SIGMRTTF
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