Gene BURPS1106A_A2498 details

Gene Information

• Locus tag: BURPS1106A_A2498
• ID: 4905674
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009078
• Strand: +
• Start bp: 2460820
• End bp: 2462694
• Gene Length: 1875 bp
• Protein Length: 624 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 640145602
• Product: endonuclease/exonuclease/phosphatase family protein
• Protein accession: YP_001076529
• Protein GI: 126455741
• COG category: [R] General function prediction only
• COG ID: [COG2374] Predicted extracellular nuclease

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.209723
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCACTC CGACGCCCCT GCTCGCCGCA CTGTCGCTCC TGTCCACCGT CGCCGCCGCG 
CCCGCGTTCG CGGCCGCCGC ATCGCCCGTC AGCACGAACT GCGGCGGCAG CGCAACGCCG 
ATCGCCGAGA TTCAGGGCGT CGGCGCGCCT TCGCCGCTCG CCGGCCAGAA CGTATCGATC 
GAGGCCGTCG TCACGGCCGA TTTCGGCGGC GCCGACGGCT TCGGCGGCTT CTTCGTCCAG 
CAGGCCGATC CGCAGCGCCG CAACCAGCCC GGCGTATCCG AAGGGCTGTT CGTCTACTCG 
CCGAAAGCCC GCGCGCGCGC GGGCGAGCTC GTGCACGTGA CGGGCAAGGT CGAGGAGAAA 
TACGGGCAGA CGCAGCTCAC GCTGTCGGGC GCCGTCGCGG TCTGCGCGAG CGGCCAGTCG 
GTCACGCCGG CGACGCTCGC GCTGCCCGTC GACAGCCCGA ACGCGTTCGC CGCGTACGAA 
GGCATGCTCG TGCGCCTGCC GCAAACGCTG ACCGTCACCG AGGTCTATGA ACTCGGCCGC 
TACGGCAGCG TGCTGCTCAG CAACGGGCGT CTGCGCACGC CGACGAGCGT CGTGCCGCCC 
GCGCAGGCGA AGGCGGTGGC CGAGGCGAAT GCGCGCAACC GGCTGATCCT CGACGACGGC 
TCGAACAAGC AGAATCCGGC GACCGTCCCG TATCCGGCGC CGGCGCTCTC CGCCGCGAAC 
ACGCTGCGCG CGGGCTACAC GGCCGCCGAT GTCGAGGGCG TGCTCGAGCT GCGCTACGGC 
GCATGGCGCC TGCAACCGGT GCCGGGCGCG CGTACGCCCA CTTTCGGCGC GAGCGCGAAC 
CCGCGCACCG CCGCGCCCGC GCGCGATCCT CGCGCGAACC TGCGGGTCGC TTCGTTCAAC 
GTACTGAACT ACTTCAACGG CGACGGCGCG GGCGGCGGCT TCGACGATCC GAGCAACCGG 
GGCGCGAAGA ACTACGAAGA GTTCGTCCGG CAGGACGCGA AGATCGTCAG CGCGCTGAAG 
GCGCTCGACG CCGACGTGAT CGGCCTGATG GAAATCGAGA ACGACGGCTA CGGCCCGCTG 
AGCGCGGTGC GCCAGCTCGC GGCGAAGCTC GGCGAGAACT GGCGGGTGGT GGACCCGGGC 
AGCGCGCGGC TCGGCGGCGA TGCGATCGCG GTCGCGCTGA TCTACGACAG CCGCAAAGTG 
AAGCCGATCG GCAACGCGGC GACGCTCGCG ATCGACGACA AGAACCGTCA GCCGCTCGCG 
CAGACATTCC GGCCACTCGG CGGCTCGCGT GCTGTGACGG TCGCCGTCAA TCATCTGAAA 
TCGAAGAACT GCCCGGATGC GACGGGCGAT GACCTCGATC AGGGAGACGG CCAGGGCTGC 
TGGAATGCGA CGCGCTCGCG CGCGGCGGCG AAGATTGCCG ATTGGCTCGC GCGCAATCCG 
ACGGGCGCGC CCAGCGAAGG CGTGCTGCTG ATCGGCGACC TCAACAGCTA CACGTACGAG 
GATCCGGTTC GCACGCTCGA ATCGCGCGGC TACGTGAATC TCGTGTCGAG CAAGGTCGGC 
TCCGGCGCAT ACAGCTACGT CTACAACGGC GAGGCGGGCT ACCTCGACCA CGCGCTCGCG 
ACGAACGCGC TCGCCTGGCG CGTGAAGGCG GTGCACGACT GGCACATCAA CGCGGACGAG 
CCGATCGCCC TGCAATACAC GCTCGCATAC AAGAGCGCCG AACAGCAGCG CACGTATTAC 
GCGCCCGACG CGTATCGCTC GTCCGATCAC GATCCGGTAC TGATCGACAT CGCGCTCGCC 
GACGAATATG CGGCCGCGGC GTCGCGCCGA GGCGCGGAGA TGGCGGCCGC GCACAGCCGT 
CGCCCGTGGC ATTGA 

 

Protein sequence

MRTPTPLLAA LSLLSTVAAA PAFAAAASPV STNCGGSATP IAEIQGVGAP SPLAGQNVSI 
EAVVTADFGG ADGFGGFFVQ QADPQRRNQP GVSEGLFVYS PKARARAGEL VHVTGKVEEK 
YGQTQLTLSG AVAVCASGQS VTPATLALPV DSPNAFAAYE GMLVRLPQTL TVTEVYELGR 
YGSVLLSNGR LRTPTSVVPP AQAKAVAEAN ARNRLILDDG SNKQNPATVP YPAPALSAAN 
TLRAGYTAAD VEGVLELRYG AWRLQPVPGA RTPTFGASAN PRTAAPARDP RANLRVASFN 
VLNYFNGDGA GGGFDDPSNR GAKNYEEFVR QDAKIVSALK ALDADVIGLM EIENDGYGPL 
SAVRQLAAKL GENWRVVDPG SARLGGDAIA VALIYDSRKV KPIGNAATLA IDDKNRQPLA 
QTFRPLGGSR AVTVAVNHLK SKNCPDATGD DLDQGDGQGC WNATRSRAAA KIADWLARNP 
TGAPSEGVLL IGDLNSYTYE DPVRTLESRG YVNLVSSKVG SGAYSYVYNG EAGYLDHALA 
TNALAWRVKA VHDWHINADE PIALQYTLAY KSAEQQRTYY APDAYRSSDH DPVLIDIALA 
DEYAAAASRR GAEMAAAHSR RPWH