Gene BURPS1106A_A2401 details

Gene Information

• Locus tag: BURPS1106A_A2401
• ID: 4905683
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009078
• Strand: +
• Start bp: 2377280
• End bp: 2379229
• Gene Length: 1950 bp
• Protein Length: 649 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 640145505
• Product: hypothetical protein
• Protein accession: YP_001076432
• Protein GI: 126458440
• COG category: [S] Function unknown
• COG ID: [COG4655] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.612705
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGCACT GGCGCGATAC GCGCGCAGCC GGCGACATCG CGCGATGTCG GCCGGCCGGA 
TGCGCCGCGG ACGACCACAC AGGCCCGATG ACGCCGCTCG ACCGCGCATC GCGTCGACAA 
CGACACGCAA CGCCGACGAA GCACTACGAG GTTGGAATGA ACGAGCCGAC ACGCCAGACC 
ACCGGGGACC TTTCCGAGCG TCGCGGGCCG AATCGACGGC GCCGCGCGCC GCGCTCGCCG 
GCGCGCCAGC GCGGCTCGCT CGCCATCATC GCGGCAATCG CGATCGGCGT CGTGATCGCC 
GCGCTCGGCG CGGTCGACCT CGGCAATCTG TTCTATCAGC GCCGCGCGCT GCAAAGCATC 
GCCGACCTCG CCGCGCTCGC GGCCGCGCAG ACGATGGACG ACGGCTGCGC GAAGCCGGCC 
GCCACCGCGC AATCGGCCGC GCGCGGCAAC GGCTTCGACA GCACCGCGTC GGGGCAATCG 
ATGACGGTCG TCTGCGGCAG ATGGGACGTG AAGGACAACG TCGGCCCGAG CTTCTTCGCG 
GGTTCGGCAT CGGGCGCCGC GGCCGGCAGC GACGCGCAGC TCAACGCGGT TCAAGTGACG 
GTCACGCGCG CCGTGCCTTA CTACTTCCTC GGCGCGCAGC GCACGATCGC GGCGACCAGC 
ACCGCAGAGG CGACCAATGT CGGCGCCTAC TCGATCGGCA CGACGCTCGC GCAACTGCAA 
GGCGGCGTCG TGAACGCGCT GCTCAACGGG CTGCTCGGCG CGAATCTGAA TCTGTCGGTG 
TTGTCGTATC AAGGCCTTGC CAATGCGCGA ATCAGGATCA AGGACCTGAT GGCCGCCGCG 
AACGTCGGCA CCGTGAGCGC GCTGCTGAGC ACGCAGACGA CCGTCCCGCA GCTCGCGAAC 
TGGATGCTGA GCGCGCTGTC GCAGACCTCG GTCGCGAATG CCGACTTGCA GACGAGCATC 
GGCGCGCTAC AGACGATCGT CAGCGCGAAC ATTCCGGGCG GCCGGACTTT CACGATCGGC 
AACACCGCGA ATTCGGCGGG CATCTTCTCG ATCGGCCTGT CCAATCCGCA GGCCGCGCTC 
GACGCGACGT TCAGCCCGTT CGACGCACTT CTCGTCGCGG CCGAGATCGC GACCGGGCAA 
ACGGCGTTCT CGCTCGCGAA CGGGCTGAAC ATCGGCGGGT TGAACGCGAA TCTGCAAGTG 
CAGATCATCC AGCCGCCCGT GCTCGGCATC GGCGAAGCGG GCATCGACCC CGTCACGAAA 
ACGTGGCGCA CGATCGCACG CACCGCGCAG GTGCGACTCT ATCTGAACAT CGGACTCGGC 
ACGGCGAACC TGCCGCTCGG GCTGCTCGGC GCGCTCCTGC CGGTGCAGGT GAATCTGCCG 
CTATCGCTGC AGATCGCGCC GGGCCAGGCG TGGCTGCAAT CGGCGAGCTG CACGGCGTCG 
CCGTCGACTT GCGCCTCGGC CATCGGCGTG CAGACGGGCC TCACGAATCT GTGCATCGGC 
GACACGCCGG CCAACATGTC CGCGTCGCTG CCGTTCACCT GCTCGACGCC CGCGACGCTC 
GTCAACGTCG CGAACCTCGT GACGATCAAG TCGCTCGTGT CGTTCCCGGC CGACGTGCCC 
GCGAGCCAGA CGCCGACGCT CACGTTCTAC GGCACGACGG GCGGCTATCA GAGCACGAAC 
TCGAACGGCG TCGGCAGCGT GCTCGGCAAT GCGCTGTCCG GCCTCGGCGC ATCGCTGCAG 
CAGACGCAGA TCTCGCTGTT CGGCATCAGC CTGCCGCTCG GCCCGATCCA GACCGCGCTC 
AATGCGTTCC TGGGCGGCGT GCTGCCGCCG CTGCTGTCGG GGCTCGACGC CGCGATCGTG 
CCGCTGCTGC AACTGCTAGG CGTGCAGGTC GGCGAAAGCA CGATTCACGA CATGTCGCTG 
ACTTGCGGGG TGTCGCAGCT CGTCTATTGA 

 

Protein sequence

MMHWRDTRAA GDIARCRPAG CAADDHTGPM TPLDRASRRQ RHATPTKHYE VGMNEPTRQT 
TGDLSERRGP NRRRRAPRSP ARQRGSLAII AAIAIGVVIA ALGAVDLGNL FYQRRALQSI 
ADLAALAAAQ TMDDGCAKPA ATAQSAARGN GFDSTASGQS MTVVCGRWDV KDNVGPSFFA 
GSASGAAAGS DAQLNAVQVT VTRAVPYYFL GAQRTIAATS TAEATNVGAY SIGTTLAQLQ 
GGVVNALLNG LLGANLNLSV LSYQGLANAR IRIKDLMAAA NVGTVSALLS TQTTVPQLAN 
WMLSALSQTS VANADLQTSI GALQTIVSAN IPGGRTFTIG NTANSAGIFS IGLSNPQAAL 
DATFSPFDAL LVAAEIATGQ TAFSLANGLN IGGLNANLQV QIIQPPVLGI GEAGIDPVTK 
TWRTIARTAQ VRLYLNIGLG TANLPLGLLG ALLPVQVNLP LSLQIAPGQA WLQSASCTAS 
PSTCASAIGV QTGLTNLCIG DTPANMSASL PFTCSTPATL VNVANLVTIK SLVSFPADVP 
ASQTPTLTFY GTTGGYQSTN SNGVGSVLGN ALSGLGASLQ QTQISLFGIS LPLGPIQTAL 
NAFLGGVLPP LLSGLDAAIV PLLQLLGVQV GESTIHDMSL TCGVSQLVY