| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A2314 |
|---|
| Symbol | leuD |
|---|
| ID | 4904244 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | - |
|---|
| Start bp | 2294134 |
|---|
| End bp | 2294784 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640145419 |
|---|
| Product | isopropylmalate isomerase small subunit |
|---|
| Protein accession | YP_001076347 |
|---|
| Protein GI | 126457106 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
|---|
| TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAT TCAATGTGCA TACCGGCGTC GTGGCGCCGC TCGATCGCGA GAACGTCGAC
ACCGACGCGA TCATTCCGAA GCAGTTCCTG AAGTCGATCA AGCGCACGGG CTTCGGCCCG
AACGCGTTCG ACGAGTGGCG CTATCTCGAT CACGGCGAGC CCGGCCAGGA CAACTCGAAG
CGTCCGCTGA ACCCGGACTT CGTGCTGAAC CAGCCGCGCT ATCAGGGCGC ATCGGTGCTG
CTCGCGCGCA AGAACTTCGG CTGCGGCAGC TCGCGCGAGC ACGCGCCGTG GGCGCTGCAG
CAGTACGGCT TTCGCGCGAT CGTCGCGCCG AGCTTCGCCG ACATTTTCTT CAACAACTGC
TACAAGAACG GCCTGCTGCC GATCGTGCTG ACCGAGCAGC AGGTCGACCA CCTGTTCAAC
GACACGTACG CGTTCAACGG CTATCAGCTG ACGATCGATC TGGACGCGCA GGTCGTGCGC
GCGCCGGACG GCCGCGAGTA TCCGTTTGAA ATCACCGCGT TTCGCAAGTA CTGCCTGCTG
AACGGCTTCG ACGACATCGG GCTCACGCTG CGGCACGCGG ACAAGATCCG TCAGTTCGAG
GCCGAGCGGC TCGCGAAGCA GCCGTGGCTC GACAACCGGC TGGTCGGCTG A
|
|---|
| Protein sequence | MEKFNVHTGV VAPLDRENVD TDAIIPKQFL KSIKRTGFGP NAFDEWRYLD HGEPGQDNSK
RPLNPDFVLN QPRYQGASVL LARKNFGCGS SREHAPWALQ QYGFRAIVAP SFADIFFNNC
YKNGLLPIVL TEQQVDHLFN DTYAFNGYQL TIDLDAQVVR APDGREYPFE ITAFRKYCLL
NGFDDIGLTL RHADKIRQFE AERLAKQPWL DNRLVG
|
|---|
| |