| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A2311 |
|---|
| Symbol | asd |
|---|
| ID | 4905315 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | - |
|---|
| Start bp | 2291555 |
|---|
| End bp | 2292676 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640145416 |
|---|
| Product | aspartate-semialdehyde dehydrogenase |
|---|
| Protein accession | YP_001076344 |
|---|
| Protein GI | 126456576 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01745] aspartate-semialdehyde dehydrogenase, gamma-proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.369518 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTAG GTCTCGTAGG TTGGCGCGGC ATGGTCGGCA GCGTGCTGAT GCAGCGCATG
CAGGAAGAAG GCGATTTCGA TCTGATCGAG CCGGTGTTTT TCAGCACCAG CAACGCGGGC
GGCAAGGCGC CGTCGTTCGC GAAAAACGAG ACCACGCTCA AGGATGCGAC GAGCATCGAC
GACCTGAAGA AGTGCGACGC GATCATCACG TGCCAGGGCG GCGATTACAC GAGCGACGTG
TTCCCGAAGC TGCGCGCGGC CGGCTGGAAC GGCTACTGGA TCGATGCGGC GTCGTCGCTG
CGGATGAAGG ACGACGCGGT GATCATTCTC GATCCCGTGA ACCTGAACGT GATCAAGGAC
GCGCTCGTCA ACGGCACGAA GAACTTCATC GGCGGCAACT GCACGGTCAG CCTGATGCTG
ATGGCGCTGG GCGGCCTGTT CCGCGAGAAC CTCGTCGACT GGATGACGGC GATGACCTAC
CAGGCCGCGT CGGGCGCGGG CGCGCAGAAC ATGCGCGAGC TGCTCGCGCA GATGGGCGCG
CTCAACGGCG CGGTGGCGGC GCAGCTCGCC GATCCGGCCT CGGCGATCCT CGATATCGAC
CGCCGCGTGC TCGCCGCGAT GAACGGCGAC GCGATGCCGA CGAGCCAGTT CGGCGTGCCG
CTTGCCGGCT CGCTGATTCC GTGGATCGAC AAGGATCTCG GCAACGGCAT GTCGAAGGAA
GAGTGGAAGG GCGGCGCGGA AACCAACAAG ATCCTCGGCA AGCCGGCGAT GGGCGAGCCG
GGCTCGATTC CGGTCGACGG CCTGTGCGTG CGGATCGGCG CGATGCGCTG CCACTCGCAG
GCGCTCACGA TCAAGCTGAA GAAGGACGTG CCGCTCGACG AGATCAACGG CATGCTCGCA
TCGGCGAACG ACTGGGTGAA GGTCGTGCCG AACGAGCGCG AGGCGTCGAT GCGCGATCTG
TCGCCGGCGA AGGTGACGGG CACGCTGTCG GTGCCGGTCG GCCGCCTGCG CAAGCTCGCG
ATGGGTGGCG AATACCTGTC GGCATTTACC GTCGGCGATC AATTGCTGTG GGGCGCGGCC
GAGCCGCTGC GCCGGATGCT GCGCATTCTG CTCGACAAGT AA
|
|---|
| Protein sequence | MNVGLVGWRG MVGSVLMQRM QEEGDFDLIE PVFFSTSNAG GKAPSFAKNE TTLKDATSID
DLKKCDAIIT CQGGDYTSDV FPKLRAAGWN GYWIDAASSL RMKDDAVIIL DPVNLNVIKD
ALVNGTKNFI GGNCTVSLML MALGGLFREN LVDWMTAMTY QAASGAGAQN MRELLAQMGA
LNGAVAAQLA DPASAILDID RRVLAAMNGD AMPTSQFGVP LAGSLIPWID KDLGNGMSKE
EWKGGAETNK ILGKPAMGEP GSIPVDGLCV RIGAMRCHSQ ALTIKLKKDV PLDEINGMLA
SANDWVKVVP NEREASMRDL SPAKVTGTLS VPVGRLRKLA MGGEYLSAFT VGDQLLWGAA
EPLRRMLRIL LDK
|
|---|
| |