| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A2288 |
|---|
| Symbol | |
|---|
| ID | 4905788 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | - |
|---|
| Start bp | 2266936 |
|---|
| End bp | 2269398 |
|---|
| Gene Length | 2463 bp |
|---|
| Protein Length | 820 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640145393 |
|---|
| Product | glycosyl transferase group 1 family protein |
|---|
| Protein accession | YP_001076321 |
|---|
| Protein GI | 126457354 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.683447 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGCG ATCTTGCAGA ACATCCGTTG CAGCGCGCCG CGACGTTTCA GGACGTCGAG
CGCGCCGCGC GCGACGCGCG CAGCGCCGAT GCGCCGCCGC CCGCGCATCG CGCGCGCGAT
GCGGCGCGGC CGCTGCGCGT GGCGATCGTG CACGACTGGC TCGTCACCTA CGCGGGCGCC
GAGCGCGTGC TCGAGCAGAT CGTCGCGTGT TTTCCGGATG CGGATCTGTT CGGCCTCGTC
GATTTCCTCG ACGACCGCAC GTTCCTGCGC GGCAAGCCGG TTACCACGTC GTTCATCCAG
AGGCTGCCGT ACGCGCGCAC GAAGTACCGC AGCTACCTGC CGCTGATGCC GCTCGCGATC
GAGCAGCTCG ACGTGTCCGG GTACGATCTC GTGATCTCGA GCAGCCACGC GGTCGCGAAG
GGCATCCTGA CCGGGCCCGA CCAGGTGCAT GTGAGCTACG TGCATTCGCC GATCCGCTAC
GCGTGGGATC TCCAGCATCA GTACCTCGAG CAGTCGCAGT TGACGCGCGG CGTCAAATCG
GCGCTCGCGC GGCTGATCCT GCATTACATC CGCAACTGGG ACGTGCGCAC GTCGAATTCG
GTCGACTGCT TCGTCGCGAA CTCGGCGTTC ATCGCGCGGC GCATCCGCAA GGTCTATCAG
CGCGACGCGG CGGTCGTGTT TCCGCCCGTC GACGTCGACG CGTTCGCGCT GTCGACGCGG
AAGGAGGACT TCTATCTGAC CGCCTCGCGG ATGGTGCCGT ACAAGAAGAT CGATCTGATC
GTCGACGCGT TCGCGCAGAT GCCCGGGCGC CGGCTCGTCG TGATCGGCGA CGGGCCGGAC
ATGCGCAAGA TCCGCGCAAA GGCCGCGCCG AACGTCGAGA TCATGGGCTA TCAGCCGTTC
GCGGTGTTGC AGGACCGGAT GCGCCGCGCC AAGGCGTTCG TGTTCGCCGC CGAGGAGGAT
TTCGGGATCT CGGTCGTCGA GGCGCAGGCC TGCGGCACGC CCGTCATTGC GTTCGGCAAG
GGCGGCGCGC TCGAGACGGT GCGCGACGCG GCATCGCACG AGCGGCCGAC GGGCGTGTTC
TTCGATGAGC AGAGCGTGCG GGCGATCGTC GCCGCGGTCG ACGATTTCGA GCGCGCGCCC
GCGCGCTTCA AGCCGGAAGA TTGCCGCGCG AACGCCGAGC GGTTTTCCGC CGCGCATTTC
CGGCGGCGCT TCGTCGCGCA GATCGACGCG CTGCTGCCGA ACGCGCAGGC GCGCGCGAAG
CTCGCGGGCG CGATGCGGCC GGCCGGCCGC GCGTCGCTCG CGGCGAGCGG CCTGAGGGCG
CTCGTGCTCG ACCAGAGCGG CGTGCTGGGC GGCGCCGAGC TGTCGCTGCT CGAGATCATG
AAGCACCTGC GCGAGTCGGC CGACGTCGTG CTGTTCGACG ACGGGCCGTT TCGCGCGGCA
CTGGACGACG CGGGCGTGCA CGTGGACGTG GTCGGCCAGC GCGCGCTCGC GGGCGTGCAC
AAGCAGGGCG GCGTGTCGCT GCGCGCGGCG GGCAGCCTGC TCGCGCTCGT GCGCGAGGTC
GCGCGGCGCG CGCGCGACGC CGACGTGATC TACGCGAACA CGCAGCGCGC GATGGTGGTC
GGCGCGCTCG CGGGGCGGCT CGCGCGCAAG CCGGTGGTCT GGCATCTGCG CGACATCGTG
AGCGACGCGC ACTTCGGCCC GAAGCAGCGG CTCGCGATCA AGCAGTGCGC GCGGCTCGGC
GTGACACGCG TGATCGCGAA TTCGGACGCG TCCGCGCGCG CGTTTCTCGA ATTGACGGGC
TTCGAGCGGC GCGCGGTGCA GGTGGTCTTC AACGGCATCT CGGCCGAACC GTTCGTCGCG
CTGGAACCGG TCCGCCCGGC CGCGCTGCGC GTGCGCTTCG GGCTGCCCGC CGATGCGTGG
ATCGTCGGCT CGTTCAGTCG GCTCGCGCAC TGGAAAGGGC AGCACGTGCT GCTCGAGGCG
GCGCGGCTCT ATCCGGACAT GCACGTCGCG CTCGTCGGCG CGCCGCTTTT CGGCGAGGAC
GAGTACGCGG CCGAGCTGCG CGGCTTCGTC GCGCTGCACG GGCTCGGCGA GCGCGTGCAT
TTCCTCGGCT TTCAGCGCGA CGTCGCCGCC TGCATGAAGG CGGTCGACGT CGTCGCGCAC
ACGTCGATCA CGCCGGAGCC GTTCGGCCGC GTGATCGTCG AGGGGATGCT CGCGAAGCGG
CCCGTCGTCG CGGCGCGCGC GGGCGGCGTC GTCGAGATCG TCGACGACGA CGTGAACGGC
CTGCTCTGCG AGCCCGGCGA CGCGCATGCG CTTGCCGACA CGCTCGCCGC GCTGCGCACC
GATGCGGTGC TTTGCGGGCG GCTCGTCGCG AACGGCTACG ACACCGCGGT GAACCGGTTC
GGCACGCAGA TCTATGTCGA GCAGGTCGAG CGCATTCTCG TCGAGACCGC GCGGCGGCGG
TGA
|
|---|
| Protein sequence | MNRDLAEHPL QRAATFQDVE RAARDARSAD APPPAHRARD AARPLRVAIV HDWLVTYAGA
ERVLEQIVAC FPDADLFGLV DFLDDRTFLR GKPVTTSFIQ RLPYARTKYR SYLPLMPLAI
EQLDVSGYDL VISSSHAVAK GILTGPDQVH VSYVHSPIRY AWDLQHQYLE QSQLTRGVKS
ALARLILHYI RNWDVRTSNS VDCFVANSAF IARRIRKVYQ RDAAVVFPPV DVDAFALSTR
KEDFYLTASR MVPYKKIDLI VDAFAQMPGR RLVVIGDGPD MRKIRAKAAP NVEIMGYQPF
AVLQDRMRRA KAFVFAAEED FGISVVEAQA CGTPVIAFGK GGALETVRDA ASHERPTGVF
FDEQSVRAIV AAVDDFERAP ARFKPEDCRA NAERFSAAHF RRRFVAQIDA LLPNAQARAK
LAGAMRPAGR ASLAASGLRA LVLDQSGVLG GAELSLLEIM KHLRESADVV LFDDGPFRAA
LDDAGVHVDV VGQRALAGVH KQGGVSLRAA GSLLALVREV ARRARDADVI YANTQRAMVV
GALAGRLARK PVVWHLRDIV SDAHFGPKQR LAIKQCARLG VTRVIANSDA SARAFLELTG
FERRAVQVVF NGISAEPFVA LEPVRPAALR VRFGLPADAW IVGSFSRLAH WKGQHVLLEA
ARLYPDMHVA LVGAPLFGED EYAAELRGFV ALHGLGERVH FLGFQRDVAA CMKAVDVVAH
TSITPEPFGR VIVEGMLAKR PVVAARAGGV VEIVDDDVNG LLCEPGDAHA LADTLAALRT
DAVLCGRLVA NGYDTAVNRF GTQIYVEQVE RILVETARRR
|
|---|
| |