| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A2254 |
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| Symbol | selB |
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| ID | 4905143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | - |
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| Start bp | 2235226 |
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| End bp | 2237181 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640145359 |
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| Product | translation elongation factor, selenocysteine-specific |
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| Protein accession | YP_001076287 |
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| Protein GI | 126455898 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG3276] Selenocysteine-specific translation elongation factor |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00475] selenocysteine-specific elongation factor SelB
[TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0142669 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGCAG GCGCCGACGG GCCCGCGCGC ATGATCGTCG GGACCGCAGG CCACATCGAT
CACGGCAAGA CGACGCTCGT GCGCGCGCTG ACGGGCGTCG ACACCGATCG GCTGAAGGAA
GAGAAGGCGC GCGGAATCTC GATCGAGCTC GGCTACGCGT ACACGCCGCT GCCGAACGGC
GACGTGCTCG GCTTCATCGA CGTGCCCGGC CATGAAAAGC TCGTCCACAC GATGGCCGCG
GGCGCGTGCG GGATCGACTT CGCGCTCGTC GTGATCGCGG CCGACGACGG CGTGATGCCG
CAGACCCGCG AACATCTGTC GATTCTGCAA CTGCTGGGCG TCGCGCATGG CGCGCTCGCG
CTGACGAAAT GCGATCGCGT CGACGCGGCG CGGGTCGCGC GGGTGCGCGA CGAGATCCGC
GCGTGGCTCG CGGCCTCACC GCTCGCCGAT GCGCCGGTTT TCGAGACGCG CGCGAGCGAG
CCGGACGACG CGGGCGTCGC CGCATTGAAC GCGCACCTGC GCGACACGGC GCTCGCCTGG
CGCGCGCGGC GCGACGACGG CCTGTTCCGG CTCGCGGTCG ATCGCGTGTT CACGCTCGCG
GGGCAAGGCA CCGTCGTGAC GGGCACCGCG GTCGCGGGGC GCGTGCGCAC GGGCGACTCG
CTCGCCGTCG CGCGCACGGG CGAAACGGTG CGCGTGCGCA GCATCCATGC GCAGAACCGC
GCGACCGACG TCGGCCATGC GGGCGAGCGC TGCGCGCTGA ATCTCGCGGG CATCGACAAG
GCGGCGCTCG CGCGCGGCGA TGCGATCGTC GACGCGCGGC TCGCGACGCT TTCGCCACGC
ATCGACGTCG AATTGACGTT GACGGCGGAC GCCGACCTGA CGATCACGCA CTGGACGCCG
CTGCACGTGC ATCTCGGCAC GCTGCACCGG GTCGCGCACG TTGCGCTGCT CGAAGGCGAG
ACGCTCGGGC CCGGCCGGCG CGCCCGCGCG CAGTTGAATT TCACGGAGCC GGTGTTCGCC
GCGCCGGGCG ATCGCTTCAT CGTGCGCGAC GCGCAGGCGA CGCGCACCGT GGGCGGCGGG
CGCGTGCTCG ATCCGTTCGG CCCCGCGCGC AAGCGGCGCA CGCGCGCGCG ACGCGCGTGG
CTCGACGCGC TCGCGGCGTG GCTCGACGAA GGCCGTCTCG ACGCGTTGCT CGACGAGGCG
CCGCTCGGCA TCGCGCGCGC GACGCTGATG CATCTGACCG GCTTGCCGGC GCAGGCGTGG
GCGTTGCCGG CCGATGCGGT GAGCGTCGCC GCGCCGGGCA AGCACGCGGA CGAAGCGCGC
GTGCTTGCGC GCGGGCATTG GGACGCGCTG CGCACGCGCG TGCTCGATGC GCTCGCGGCA
TTCCATCAGC GCTCGCCGGA CGAGCAGGGG CCGGATGTCG CGCGGCTGCG CCGGATCGCC
GCGCCGCTCG CGGACGACGC GTTGTGGCGC GCGCTGACCG ATGCGCTGAT CGCCGAGGGC
GCGATCGTGC GCAGCGGCCC GTGGCTGCAT GTGCCGTCGC ATGCGGTGAG CTTCGACGCG
GCCGAGGAGG CGTTGGCCGG GCGCTTGCTG CCGCTCGTCG CGGCGGGCCG CTACGATCCG
CCGTGGGTGC GCGATCACGC GGCGGCGACG CTCATGGCGG AGGACGCGGT GCGCGTGCTG
CTGCGCAAGC TCGCGCGGCG CGGCGACGTG CATCAGGTCG TGCGGGATCT GTTCTATCAC
CGCGACGTGA TCGCGGAGCT TGCGCGACTG ATCGCGCGAC TCGCGGGCGA GCACGGCGGC
GGGCTCGATG CGGCGACGTT TCGCGACGCG ACCGGGCTCG GCCGCAAGCG GGCGATTCAA
ATTCTCGAGT TCTTCGATCG CGTTGGGTAT ACTCGCTTCC ACCGCGACCT GCACTGGTTG
CGGGCTGATA GCCGGTTGCT GGCCGGCTCG CGGTAG
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| Protein sequence | MRAGADGPAR MIVGTAGHID HGKTTLVRAL TGVDTDRLKE EKARGISIEL GYAYTPLPNG
DVLGFIDVPG HEKLVHTMAA GACGIDFALV VIAADDGVMP QTREHLSILQ LLGVAHGALA
LTKCDRVDAA RVARVRDEIR AWLAASPLAD APVFETRASE PDDAGVAALN AHLRDTALAW
RARRDDGLFR LAVDRVFTLA GQGTVVTGTA VAGRVRTGDS LAVARTGETV RVRSIHAQNR
ATDVGHAGER CALNLAGIDK AALARGDAIV DARLATLSPR IDVELTLTAD ADLTITHWTP
LHVHLGTLHR VAHVALLEGE TLGPGRRARA QLNFTEPVFA APGDRFIVRD AQATRTVGGG
RVLDPFGPAR KRRTRARRAW LDALAAWLDE GRLDALLDEA PLGIARATLM HLTGLPAQAW
ALPADAVSVA APGKHADEAR VLARGHWDAL RTRVLDALAA FHQRSPDEQG PDVARLRRIA
APLADDALWR ALTDALIAEG AIVRSGPWLH VPSHAVSFDA AEEALAGRLL PLVAAGRYDP
PWVRDHAAAT LMAEDAVRVL LRKLARRGDV HQVVRDLFYH RDVIAELARL IARLAGEHGG
GLDAATFRDA TGLGRKRAIQ ILEFFDRVGY TRFHRDLHWL RADSRLLAGS R
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