| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A2202 |
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| Symbol | |
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| ID | 4906289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | + |
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| Start bp | 2151501 |
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| End bp | 2152355 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640145307 |
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| Product | YscJ/HrcJ family type III secretion apparatus lipoprotein |
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| Protein accession | YP_001076235 |
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| Protein GI | 126457668 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4669] Type III secretory pathway, lipoprotein EscJ |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain
[TIGR02544] type III secretion apparatus lipoprotein, YscJ/HrcJ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.357372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCATGA AACCACTCCG TCTCCCGATT TCCGCCGCCG GCGCGCGCCG CGCCGCCCGC
CTCGCCGCGC TCGTCGCGTG CGTGGCGCTC TTCGCCGGCT GCCGGCAGGA GCTGTACGGC
GGCCTCGCCG AGCGCGACTG CAACGAGATG ATGGCCGCGC TGCTGCAAAA CGGCGTCGAC
GCGCAGAAGA AGACGCCCGA CGGCGGCAAG ACATGGACGC TCGCCGTCGA CGACAAGCAG
ATCGTCAAGG CGATGGAAGT GCTGCGCGCG CGCGGGCTGC CCGCGACGCG CTACGACGAT
CTCGGCGCGC TGTTCAAGAA GGACGGCCTC GTGTCGACGC CGACCGAGGA GCGCGTGCGC
TTCATCTACG GCGTGTCGCA GGAGCTGTCG GACACGCTGT CGAAAATCGA CGGCGTCGTC
GTCGCGCGCG TGCACATCGT GCTGCCGAAC AACGATCCGC TCGCGCAGGT CGCGAAGCCC
TCGTCGGCCT CGGTGTTCAT CAAGTACCGG CCGAACGCGA ATCTCGCGAC GCTCACGCCG
CAGATCAAGA ACCTCGTCGT TCATAGCGTC GAAGGGCTGA CGTACGACGA AGTGAGCGTC
ACCTCCGTCG CGGCCGATCC GGTCGATCTC GTGTCGGCCG CGCAGCCCGC CGCGCAGAAC
TCCCGCGGCG CGACGCTCGT CGGCGTGCTG ATCGCGCTCG CCGTGGGCGG CGCGCTCGCG
GCCGCGGGCG GCGCGCTGTG GTGGCGCGCG CGCAAGCGCG GCGGCGGCGC GGGCGCGCAC
GGGATCGCCG CGCGGCCGCG CGGCGGCGCC CGCGACGCGA AGGCCGCCGC GCCCCGGCAG
GCCGGCGCGC AATGA
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| Protein sequence | MIMKPLRLPI SAAGARRAAR LAALVACVAL FAGCRQELYG GLAERDCNEM MAALLQNGVD
AQKKTPDGGK TWTLAVDDKQ IVKAMEVLRA RGLPATRYDD LGALFKKDGL VSTPTEERVR
FIYGVSQELS DTLSKIDGVV VARVHIVLPN NDPLAQVAKP SSASVFIKYR PNANLATLTP
QIKNLVVHSV EGLTYDEVSV TSVAADPVDL VSAAQPAAQN SRGATLVGVL IALAVGGALA
AAGGALWWRA RKRGGGAGAH GIAARPRGGA RDAKAAAPRQ AGAQ
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