| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A2199 |
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| Symbol | |
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| ID | 4906150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | - |
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| Start bp | 2149175 |
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| End bp | 2150437 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640145304 |
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| Product | type III secretion system protein HrcU |
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| Protein accession | YP_001076232 |
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| Protein GI | 126458610 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1377] Flagellar biosynthesis pathway, component FlhB |
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| TIGRFAM ID | [TIGR01404] type III secretion protein, YscU/HrpY family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.706014 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCCGCA AGGTAGCAGC GCGCCGGGCG CGGGGGCGCG GCGATGCGAA GCGCGCGCGC
CGGATGCGAA GCACGGCGCG CGCTTCGCAT CCGGCGGCGC GGCTTCGGCT CGGCGCGCGC
GCGGCGCGCG GCGCGCCGCT AACGTACGCG GCATCTCCGA CTCCCGAAGG AACCGCGGCG
ATGGCCGAAG AGAAAACCGA AGAGCCCACC GAGAAGAAGC TGAAGAAGGT GCGCGAGAAG
GGCCAGGTCG CCAAGAGCAA GGACATCGCC GACGCGATGA CGCTCGCGGC CGCGATCGGC
GTGCTCACGG CGTGCGAATC GATGCTCACG GGCGGCCTCT CGCGCGCGGT TCGCACCGCG
CTCGACTTCG TGCGCGGCGA GCGCACCCCG CAGGCGACGC TCGCCGCGCT GCACGATCTC
GCCGCGAGCG CCGTGCTGAC GATGCTGCCG TTCGTCGCCG CCGCGATCGT CGCGGGCATC
GTGTCGCAGG CGCCGCAGGC GGGCTTCCTG ATCACGCTCG AGCCCGTGAT GCCGAAGTTC
GACGCGATCA ATCCGATGGC GGGCATCAAG CGGATCTTCT CGCTGAAGTC GCTGCTCGAG
CTCGTGAAGA TGATCGTCAA GGCGCTCGTG CTCGCGTGCG TGGCATGGAA GATGATGACC
TCGCTGTTTC CGCTCGTCGT CGCGAGCGTG TACGAAGCGA CGCCGCAGCT CGCGCGCGTG
CTGTGGACGG TGCTGATGAA GCTGCTCGGC ACCGTGTCGG TCGTCGTCGC GGTGCTCGCG
GCGGCCGATT ACAAGATCGC ACGCGTGATG TTCGTTCGCG AGAACCGGAT GACGAAGGAG
GAAGTCAAGC GCGAGCACAA GGAGAGCGAC GGCGATCCGC ACACGAAGGG CGAGCGCCGC
CGGCTCGCGC GCGAGATTGC GACGAGCGCG CCGCCGCGGC AGCGGGTCGG CCAGGCGAAC
GTGCTCGTCG TCAACCCGAC GCACTACGCG GTCGCGATCC GCTATGCGCC CGACGAGCAT
CCGCTGCCGC GGGTCATCGA GAAGGCCGTC GACGACGGCG CGCTCGCGCT GCGCCGCCAC
GCGCACGCGC TCGGCGTGCC GATCGTCGGC AATCCGAGCG TCGCGCGCGC GCTGTACCGC
GTCGAGCGCG ACGCGTCGAT TCCCGAAGAG CTGTTCGAGA CGGTGGCCGC GATCCTGCGC
TGGGTCGAGT CCCTCTCGGG CGCGCGCGCG GTCGCCGCCG TTTCCTCCGC GAGGTCGTCA
TGA
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| Protein sequence | MGRKVAARRA RGRGDAKRAR RMRSTARASH PAARLRLGAR AARGAPLTYA ASPTPEGTAA
MAEEKTEEPT EKKLKKVREK GQVAKSKDIA DAMTLAAAIG VLTACESMLT GGLSRAVRTA
LDFVRGERTP QATLAALHDL AASAVLTMLP FVAAAIVAGI VSQAPQAGFL ITLEPVMPKF
DAINPMAGIK RIFSLKSLLE LVKMIVKALV LACVAWKMMT SLFPLVVASV YEATPQLARV
LWTVLMKLLG TVSVVVAVLA AADYKIARVM FVRENRMTKE EVKREHKESD GDPHTKGERR
RLAREIATSA PPRQRVGQAN VLVVNPTHYA VAIRYAPDEH PLPRVIEKAV DDGALALRRH
AHALGVPIVG NPSVARALYR VERDASIPEE LFETVAAILR WVESLSGARA VAAVSSARSS
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