| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A2198 |
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| Symbol | |
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| ID | 4905099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | - |
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| Start bp | 2147106 |
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| End bp | 2149178 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640145303 |
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| Product | HrcV family type III secretion protein |
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| Protein accession | YP_001076231 |
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| Protein GI | 126456562 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4789] Type III secretory pathway, component EscV |
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| TIGRFAM ID | [TIGR01399] type III secretion protein, HrcV family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.461572 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCTGA AATCCCTCAA ACTTCCCGCC GGCGGCGAGG TCGGCATCAC GGTGCTCGTC
GTCGCGATCG TCTCGCTGAT GATCCTGCCG CTGCCGCCCG AGGTGATCGA CGTGCTGCTC
GGCGTGAACA TCGCGATCAG CGTCACGCTG CTGATGGTGA CGATGTACGT CGGCAGCATC
GTGTCGCTGT CGGTGTTCCC GTCGATCCTG CTGTTCACGA CGCTGTACCG GCTGTCGCTG
AACATCGCGT CGACGAAATC GATCCTGCTG CACGCGAACG CGGGCGACAT CATCGAGAGC
TTCGGCGAGC TCGTCGTCGG CGGCAATCTC GTCGTCGGCC TCGTCGTGTT CCTGATCATC
ACGATCGTGC AGTTCATCGT GATCGCGAAG GGCTCGGAGC GCGTGGCCGA AGTCGGCGCG
CGCTTCACGC TCGACGCGAT GCCGGGCAAG CAGATGAGCA TCGACGCGGA TCTGCGCGCG
AACATCCTGA CGCCGGACGA GGCGCGCCGC AAGCGCGCGA CGCTCGCCAA GGAAAGCCAG
TTGCACGGCG GGATGGACGG CGCGATGAAG TTCGTCAAGG GCGACGCGAT CGCCGGGCTC
ATCATCACGC TCGTGAACAT CGTCGCGGGC ATCGCGATCG GCGTGATGTA CCACGGGATG
ACGGCGGGGG ACGCCGCGAA CCGCTTCTCG ATCCTGTCGG TCGGCGATGC GATGGTGTCG
CAGATTCCGT CGCTGCTGAT CTCGGTCGCG GCCGGCGTGA TGATCACGCG CGTCGCCGAC
GATCACGACG ACGGCGACGG CACGTCGCTC GGCTCGGAGA TCGCCAGGCA ACTGGGCGGC
AGCCATCGCG CGCTGTATTT CGCCGCGGTG CTGCTGATCG GCTTCGCGGC GGTGCCCGGC
TTTCCGGCCG CGCTCTTCGT GCTGCTGTCG GGCATGCTCG CGTTCGCCGG CTACCGGCTG
CAAAAGGGCG CGCGGCGCAC GACCGCGCGC GGCGAACCGG TGATCGCGCT GCAGCGCGCG
GGCGCGAAGA GCAGCACGCC GTCGATTCTG CCGCGCGCGC CGCTATTCAC CTGCGCGATC
GGCGTGCGCG TCGCGCCCGA TCTCGTCGCC CGGCTCGCGC CCGCCGCGCT CGACCGCGCG
TTCGACGAGG AGCGCGCGAA GCTGCAGGAG GAACAGGGGC TGCCGTTTCC CGGCATCACG
CTGTGGACGA GCGACGCGCT GCCCGCGTCG ACGTGCGAGA TCCTGATGCG CGACGTGCCG
CAGGCGCGGC TCGAGTTGCC GGCCGACCAG ACGATGCTGC CCGACGCGGC GTCGGACCCG
GCGCTCGCCG GCCGCTGCAC GAAGCGCGGG CCCGCGGGCG GCCTCGCCGA GAGCTACTGG
ATCGACGACA AGGCGGTGCC GGCCGGCGCG CGCGCGTGGC GCGCCGAGCA GGTGGTCGCG
CACGAGACGA TCGCGCTGCT CAGGCGCAAC GCGCACCTGT TCCTGGGTAT TCAGGAAGCC
CAATGGATAC TCGACCAGCT CGGCGTCGAT TATCCGGGGC TCGTCGCCGA AGTGCAGAAG
GCGCTGCCGA CGCAGCGCAT CGCCGACGTG CTGCGCCGCC TGCTCGAGGA ACACATTCCG
ATCCGCAACG CGCGCGACAT CATGGAGAGC CTCGTCGCAT GGGGGCCGAA GGAGAAGGAC
ATGCTGATGC TCGCCGAGTA CGTGCGCGGC GACCTGTCGC GCTATCTCGC CTATCGCGCG
GCGCGCGGCG CGCGGCAGTT GCCGGCCGTG CTGCTCGACA TGGCGGTCGA GCAGCACATC
CGGCAGTCGA TCAAGCAGAC GCCCGCGGGC AACTTTCTCG CGCTGCCGCC CGAGCAGGTG
CGCTATCTCG TCGACAGCGT CGCGTCGTTC GTCGGCGAAG CGCCGCGCGA CGATGTCGCG
CTCGTCACGT CGATGGACGT GCGCCGCTAC ACGCGGCGCA TGATCGAGGC GCGGCTCGAC
TGGCTGCCCG TCTATTCGTA TCAGGAGCTC GGCGACCAGG TGCAATTGCA GCCGGTCGGC
CGCGTGACGA TGCCGACGGC GGCCCACGCA TGA
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| Protein sequence | MTLKSLKLPA GGEVGITVLV VAIVSLMILP LPPEVIDVLL GVNIAISVTL LMVTMYVGSI
VSLSVFPSIL LFTTLYRLSL NIASTKSILL HANAGDIIES FGELVVGGNL VVGLVVFLII
TIVQFIVIAK GSERVAEVGA RFTLDAMPGK QMSIDADLRA NILTPDEARR KRATLAKESQ
LHGGMDGAMK FVKGDAIAGL IITLVNIVAG IAIGVMYHGM TAGDAANRFS ILSVGDAMVS
QIPSLLISVA AGVMITRVAD DHDDGDGTSL GSEIARQLGG SHRALYFAAV LLIGFAAVPG
FPAALFVLLS GMLAFAGYRL QKGARRTTAR GEPVIALQRA GAKSSTPSIL PRAPLFTCAI
GVRVAPDLVA RLAPAALDRA FDEERAKLQE EQGLPFPGIT LWTSDALPAS TCEILMRDVP
QARLELPADQ TMLPDAASDP ALAGRCTKRG PAGGLAESYW IDDKAVPAGA RAWRAEQVVA
HETIALLRRN AHLFLGIQEA QWILDQLGVD YPGLVAEVQK ALPTQRIADV LRRLLEEHIP
IRNARDIMES LVAWGPKEKD MLMLAEYVRG DLSRYLAYRA ARGARQLPAV LLDMAVEQHI
RQSIKQTPAG NFLALPPEQV RYLVDSVASF VGEAPRDDVA LVTSMDVRRY TRRMIEARLD
WLPVYSYQEL GDQVQLQPVG RVTMPTAAHA
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