| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A2195 |
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| Symbol | yscR |
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| ID | 4905727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | - |
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| Start bp | 2144521 |
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| End bp | 2145171 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640145300 |
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| Product | type III secretion system protein |
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| Protein accession | YP_001076228 |
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| Protein GI | 126457083 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4790] Type III secretory pathway, component EscR |
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| TIGRFAM ID | [TIGR01102] type III secretion apparatus protein, YscR/HrcR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.406886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTCAGT TTAACGACAT CACCGGCCTC TTGATCGCCG TGCTCGTGAT GAGCATGGTG
CCGTTCATCG CGATGGTGGT CACCTCGTAC GCGAAGATCG TCGTCGTGCT CGGCCTGCTG
CGCAACGCGC TCGGCGTGCA GCAGGTGCCG CCGAACATGG TGCTCAACGG CATCGCGATT
CTCGTGTCGC TGTACATCAT GGCGCCGATC GGCTTCGCCG CGCAGCAGCA GCTTCAGGGG
CAGGCGCTGT CGCCGCAGCC GACGCAGGCG ATGCTGCAGG CGTTCGGCGC GGCGAAGGAG
CCGTTTCGCC GGTTCCTCGC CGCGCACTCG CGCGAGCGCG AGAAGCGTTT CTTCCTGCGC
TCCGCGTCGG TGATCTGGCC GCAGGCCGCG GCCGCGCAAC TGCGCGAGGA CGACCTGATC
GTCCTCGCGC CCGCGTTCAC GCTCGCGCAG ATGACCGATG CGTTCCGCAT CGGCTTCATC
CTCTACATCG CGTTCATCAT CGTCGATCTC GTGATCGCGA ACGTGCTGAT GTCGATGGGG
ATGAACCAGG TGCAGCCGAC CAACGTCGCG ATCCCGTTCA AGCTGATGCT GTTCGTCGTG
ATGGACGGCT GGTCGACGCT CGTGCACGGC CTCGTGCTGA CCTATTCCTG A
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| Protein sequence | MVQFNDITGL LIAVLVMSMV PFIAMVVTSY AKIVVVLGLL RNALGVQQVP PNMVLNGIAI
LVSLYIMAPI GFAAQQQLQG QALSPQPTQA MLQAFGAAKE PFRRFLAAHS REREKRFFLR
SASVIWPQAA AAQLREDDLI VLAPAFTLAQ MTDAFRIGFI LYIAFIIVDL VIANVLMSMG
MNQVQPTNVA IPFKLMLFVV MDGWSTLVHG LVLTYS
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