| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A2173 |
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| Symbol | |
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| ID | 4905649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | - |
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| Start bp | 2127590 |
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| End bp | 2129362 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640145278 |
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| Product | type IVB pilus formation outer membrane protein |
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| Protein accession | YP_001076206 |
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| Protein GI | 126457943 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02520] type IVB pilus formation outer membrane protein, R64 PilN family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00887816 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGTGC TGTTCGCCAT TTCATTACTG GCCGTCGCAT GGCTCGCCGG CTGCACCGGC
CTTCGCGGCG GCATCGAGCG CGACGCGCGG CGCGATTCGA ACGAAACCGG CGCGCTGCTC
AAGCGCGCAT CCGACGGCGA CAACAGCGTG CGCTCGCTCG CGCCCGTCGT CGTCGACAAC
GGGCTGTGGG TGTCCGCGGG CACCGTCAAG CTGCGCAACA GCGAGCAGTT GCCGCCGCTG
TTCGACGAGC CGGCGTCGTT CGATCGCTCG GTCGCTTCGT TGTCCGAATT CGCCGAGCAG
ATCACGCGCC TGACCCAGGT GCCGACGCAG GTCGCCGCGA GCGCGCAGCA GGCGGCCGCG
CGTTCGCAGC ACGGCGGCGC GGGCGACGCC GCGCGCGGCG CGCCGGCCTT TCTCGACGCA
TCGGGCGCGC GCGCGGTGCC GCCGCTGCCC CCCGGCCTGC CGGGCGGCGC ATCGGCGGGC
GGCGGCAAGA CGGGCGGCGG CGCGGCGGGC GCGGGCTCGG AGGGCGGCGG CGGCACGTCG
TTCGCGCCGG TGCGCGTGCT GTACGCGGGC GGCACGCTGC GCGGCCTGCT CGACGCGGCC
TGCGCGCGCT TCGGCGTGTC CTGGAAGTAC GAGCAGGGGG CGATCCGCTT CTTCTTCACC
GATACCCGCA CGTTCCAGGT CAACGCGATT CCGGGCGACT CGTCGCTGAA CGCATCGGTC
GTGAGCGGCG CGACGAGCGA CGGCGCCGCG GGCGGCTCGC AGTCGGGCGG CTCGGGGGGC
TCGGGCGGCG GCATCAACGG CGCGGGCTCC GGCACGACGG GCCTCACCGC GAACAACACG
GCGAACACCG CGGTGAACTC GCAGCTGTCG GTGTTCAACG GCCTGCAAAG CGCGATCCAA
TCGATGCTCT CGCGCTACGG CAGCTCGGTC GCCTCGCCCG CGACGGGATC GATCTCGGTG
ACCGACACGC CCGACGTGCT CGAGCGCGTC GCCGCGTTCA TGGCGCAGCA GAACCGCTCG
CTGTCGCGGC AGGTGCTGCT CAACGTGACC GTGCTCAGCG TGTCGCTGCA GGCGGGCGAC
GCGTACGGGA TCGACTGGAA CCTCGTCTAC AAGACGATGT CCGCGGGGTT CGGCATCACC
AATCCGTTCC ATCCGACGGC GCTGACGGCG CCCGCCGACA TGTCCGCGGC GGTGCTCAGC
CCGACGAGCC GCTTCAACGG CACGAAGCTG CTGATCCGCG CGCTGTCGCA GCAGGGGACG
GTGCGGCGCA AGACGTCGGC GTCGGTCACG ACGCTCAACA ACCAGCCGGT GCCCGTGCAG
GTCGCGACGC AGACGGGCTA CCTCGCGTCG GTGTCGACGA CGAACACCGC GAACGTCGGC
TCGTCGACGG CGCTCACGCC GGGCGTCGTG ACGACGGGCT TCAACATGAC GCTGCTGCCG
CACGTGCTCG ACGACGGCAC CGTGATGCTG CAGTTCTCGA CCAACATCTC GTCGCTGCTC
GAGCTGAAGG AGGTGACGAG CAGCACCGGC GGCAGCGGCC TGGCGCGCAT CCAGACGCCC
GACGTCGACA TGCGCAACTT CCTGCAGCGC GTCGCGATGA AATCGGGCGA GACGCTCGTC
ATCAGCGGCT ACGAAGGCGC GAACGATTCG CTCGACGAGC GCGGCGTGGG CACGCCGAAG
ATGATCGCGC TCGGCGGCGG CTACGAGGCG CAGCGCGCGC GCGAGGTGAT CGTGATCCTG
ATCACGCCCG TCACGCAGCG CGGCGGCGCC TGA
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| Protein sequence | MRVLFAISLL AVAWLAGCTG LRGGIERDAR RDSNETGALL KRASDGDNSV RSLAPVVVDN
GLWVSAGTVK LRNSEQLPPL FDEPASFDRS VASLSEFAEQ ITRLTQVPTQ VAASAQQAAA
RSQHGGAGDA ARGAPAFLDA SGARAVPPLP PGLPGGASAG GGKTGGGAAG AGSEGGGGTS
FAPVRVLYAG GTLRGLLDAA CARFGVSWKY EQGAIRFFFT DTRTFQVNAI PGDSSLNASV
VSGATSDGAA GGSQSGGSGG SGGGINGAGS GTTGLTANNT ANTAVNSQLS VFNGLQSAIQ
SMLSRYGSSV ASPATGSISV TDTPDVLERV AAFMAQQNRS LSRQVLLNVT VLSVSLQAGD
AYGIDWNLVY KTMSAGFGIT NPFHPTALTA PADMSAAVLS PTSRFNGTKL LIRALSQQGT
VRRKTSASVT TLNNQPVPVQ VATQTGYLAS VSTTNTANVG SSTALTPGVV TTGFNMTLLP
HVLDDGTVML QFSTNISSLL ELKEVTSSTG GSGLARIQTP DVDMRNFLQR VAMKSGETLV
ISGYEGANDS LDERGVGTPK MIALGGGYEA QRAREVIVIL ITPVTQRGGA
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