| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A2167 |
|---|
| Symbol | |
|---|
| ID | 4906424 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | - |
|---|
| Start bp | 2121987 |
|---|
| End bp | 2122466 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 640145272 |
|---|
| Product | putative type IV pilus protein |
|---|
| Protein accession | YP_001076200 |
|---|
| Protein GI | 126455726 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00337132 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACGCGT TAGCCGCCGC ACTGGCCTTC GCCTCGCTCG CCGCCGTCTA CGCGGCGCTG
CAGGGCCCGG CCGCCGTTCC CGCGCTGCAA CCGGCGCGCG CCGCGCAGGC GCTCGCCGAC
AATCTCGCCG TCTATCGCCA GGCGGCGCTC GACTACGCGC GCGCGCATCC GGGCACGCGC
GGCGCGGTGC CGAACGCGCG GCTCGCGTTT CCCGCGTGGT ATCCGGGCGC GGACCCGCTC
TGGCGCAACT ACGTCGAGAA CGGCACCGTC GTCGCGTATG CGGCGTCCGC GCCGCCCGTG
AACATCGCGG GCGAGGTCGC GACGCTCGCC GAAGGCTCGC TGCTCGCGGG CGTCGCGTAT
CGCGGCGCGG TCGTGCGCCC CGGTCGGGCG GATCCGAACG CGCCCGCGAG CGGCGTGCCG
CTGCCCGCGG GGCTCGCGAT CGCCGACGGC CTGCCGGTCT GGATGGGGCA GGCGTACTGA
|
|---|
| Protein sequence | MYALAAALAF ASLAAVYAAL QGPAAVPALQ PARAAQALAD NLAVYRQAAL DYARAHPGTR
GAVPNARLAF PAWYPGADPL WRNYVENGTV VAYAASAPPV NIAGEVATLA EGSLLAGVAY
RGAVVRPGRA DPNAPASGVP LPAGLAIADG LPVWMGQAY
|
|---|
| |