Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A2152 |
Symbol | |
ID | 4904318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | + |
Start bp | 2108094 |
End bp | 2109446 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640145257 |
Product | putative regulatory protein HipA |
Protein accession | YP_001076185 |
Protein GI | 126455544 |
COG category | [R] General function prediction only |
COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.748793 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGCGCCC GCCGCGCACG CGCGACGCGC CTGCACCTGT GGATGAACGG CCTGCCCGTC GGCTACTGGG AGCACGCGCG CGACGGCGAG CGCCTTGTCT ACTTCGACGA ATGGATCGGC GATCCGCAAG GCCGGCCGCT GTCGCTGTCG CTGCCGTTCA CGCCGGGCAA CCAGCCGTAT CGCGGTCGGC TCGTCAGCGA TTATTTCGAC AACCTGCTGC CCGACAGCGA GCCGATCCGC CGGCGAATCG CGATGCGCTA CCGCACGGGC GGCACGTCCG CGTTCGCGCT GCTCGCGACG CTCGGCCGCG ATTGCGTCGG CGCGCTGCAG ATGCTGCCGC CCGACGAAGC GCCGGACGAC ATCGAACGCA TCCGCGGCCA CGCGCTCGCC GACGCGGACA TCGCGCGCCT GCTGCGCGAA GTCACGTCCG CGCCGCAGGC CGGCCGGCAC GCGCCGCTCG ACGATCTGCG CCTGTCGATC GCCGGCGCGC AGGAGAAGAC CGCGCTGCTG CGCCATCGCG GCCGCTGGCT GCTGCCCGAA GGGAGCACGC CGACCACGCA CATCCTGAAG CTGCCGCTCG GGCTCGTCGG CAACCGGCGC GCCGACATGC GCACGTCGGT CGAGAACGAA TGGCTGTGCG CGCGGATCGT CGCCGCGTAC GGGTTGCCCG TCGCGCGCTG CGACATCGCT CAGTTCGACG ATCAGAAAGC GCTCGTCGTC GAGCGCTTCG ACCGCCGGCC GTCGCGCGAC GCACGCTGGC TCCTGCGGCT GCCGCAGGAA GACATGTGCC AGGCAACCGG CACGTCCGCG CTCGACAAAT ATCAGGCCGA CGGCGGCCCC GGCATCGAGA CGATCATGGA AGTGCTCGCC GGCTCCGAGC ACGCGCGGGA CGACCGCCGC GCGTTCTTCG CGGCGCAGAT CGTGTTCTGG CTGCTCGCCG CGACCGACGG CCACGCGAAG AACTTCAGCA TCGCGCACCT GCCCGGCAAC CGCTACCGTT CGACGCCGCT TTACGACGTG CTGTCCGCGC ATCCGGTCAT CGGCCGGGGC GCGAACCAGT TGCCCGCGCA GCGCGCGCGG CTCGCGATGG GCGTGCGCGG CAAGCACATC CACTATCCGC TGCACCAGAT CCGGCGGCGG CACTGGATCG CGCAGGGCCA GCGCGTCGGC TTCGCGCCCG CCGACGTCGA CGCGCTGATC GACACGCTGA CCGCGCGCAC CGCGGGCGTC GTCGACGCGG TGTCGGCGCG GCTGCCGCGC GATTTTCCGC GCGACGTCGC CGATGCGATC TTCAGCGGAA TGCTCGGCCT GAGCGCAAGG CTCGCCGGCG ACGCGGCCGC GCGCGCGCCA TGA
|
Protein sequence | MSARRARATR LHLWMNGLPV GYWEHARDGE RLVYFDEWIG DPQGRPLSLS LPFTPGNQPY RGRLVSDYFD NLLPDSEPIR RRIAMRYRTG GTSAFALLAT LGRDCVGALQ MLPPDEAPDD IERIRGHALA DADIARLLRE VTSAPQAGRH APLDDLRLSI AGAQEKTALL RHRGRWLLPE GSTPTTHILK LPLGLVGNRR ADMRTSVENE WLCARIVAAY GLPVARCDIA QFDDQKALVV ERFDRRPSRD ARWLLRLPQE DMCQATGTSA LDKYQADGGP GIETIMEVLA GSEHARDDRR AFFAAQIVFW LLAATDGHAK NFSIAHLPGN RYRSTPLYDV LSAHPVIGRG ANQLPAQRAR LAMGVRGKHI HYPLHQIRRR HWIAQGQRVG FAPADVDALI DTLTARTAGV VDAVSARLPR DFPRDVADAI FSGMLGLSAR LAGDAAARAP
|
| |