Gene BURPS1106A_A2104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_A2104 
Symbol 
ID4903371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009078 
Strand
Start bp2061636 
End bp2063393 
Gene Length1758 bp 
Protein Length585 aa 
Translation table11 
GC content68% 
IMG OID640145209 
Productthermolysin metallopeptidase 
Protein accessionYP_001076137 
Protein GI126457464 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3227] Zinc metalloprotease (elastase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.339655 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGCTG TTAATGCGTT TTCAATAATC AACGCAGTCA TCCATTATCT GGGGGATTAC 
ATGAAGAAAC TGTCCTGCCT GCTGTCGGTC ACCGCGATTT CCCTTGCATG CCTCAGCGCG
TTCGCGCAAG CCGACGATCC GCCGGCCGCG GCCGACCGCG CGCTGCAACT GATCCGACAG
AACCCGTCCG CCTTCCACCT CGCCGCCGGC AGCGCCGCGC GCACGCTGAA GTTCGCCGGC
GCGCAAGCGA AGGCGCCGGC GGACGGCGAC CAGTTCCAGG TGCGCGACGT GATCGTCGAC
GCCGACGGCA CCGAGCACGT GCGCTTCGAT CGCTTCTACG CGGGGCTGCC CGTGATCGGC
GGCGACGTCG TCGTCCATTC GAACCAGGGG CAACTGAAGC AGGCGAGCCT CACGCAGCCC
GCGCCGATCG ATCTCGCGGG CAAGATCGGC AAGGTGGGCG AGCGCTTCGT CGTGCGCAAC
GCGCCCGACG TGGGCGCGGA CGCGGCAAGA CGCGTCGCGT CGAAGCGCTT CGGCGCGGAC
GTGCGCCGCG TCGACGGCGC GGATCTCGTC GTGTTCGCGC GCGACGCCGC GCCGACGCTC
GCCTACGCGG TGCGCGTGTA CGGCAAGGCG ACCGACGCGC ACGGCGAGGC CGTGATCTAC
TACGTCGACG CGCGCACGGG CAACGTGCTG GACGCGCAGG ACCTGATCAA GACCGCCTCC
GTGACGGGCA CCGGCCGCTC GCTGTACTAC GGCAACCTGT CGCTCACGAC CGATCAGACC
GGCACGAACG CGTACCGGAT GCTCGATCCG ACGCGCGGCA GCGGCTCGGT CTACGACGGG
CGCGGCCTGA GCTCGGACGA AGTCGAGCAG GCGAGCGACC TGCCGATCTT CACGAGCAGC
ACGAACGTGT GGGGCAACAA CACGACGAGC GACAGGCAGA CCGTCGCCGC CGACATCGAC
TACGGCCTCG CGCTGACGTG GGATTACTAC AAGACCACGC ACAACCGCAA CGGCATCTTC
AACGACGGCC GCGGCGTGCG CAGCTACGCG CACGTGGTGT TCGACACCGG CAGCGGCACG
ACGGGCGCGA ACGCCGCGTG GCTGTCGTCG CGCGTGATGG TGTACGGCGA CGGCGAGCCG
GGCACGCGGC TGCCGAAGCC CGTCGTGTCG GTCGACGTGG CCGGGCACGA GATGAGCCAC
GGCGTGACCG AGGCCACCTC GAACCTGTAT TATTCGGGCG ACGCGGGCGG CCTGAACGAA
TCGACGTCGG ACATCTTCGG CACGCTCGTC AAGTACTACG CGAACAATCC GAACGACCCG
GGCAACTACG TGATCGGCGC GCGGATCACG AGCGGCGGCC TGCGCAAGAT GTACAAGCAG
GATCTCGACG GCCGCTCATA CAGTTGCTAC CCGTCCGGCG GCTTCTCGTG GGCGAATCCG
CGCCACGATC CGCACTACAC GTCGGGCGTC GGCAACCGGT TCTTCTATCT GCTCGCGGAA
GGCCCGGTCG CGCCGTCGAC CGATACCGGA CTGTCGAGGA GCCAGCTCGT CTGCAACGGC
GACACCGGCT TCAGCGGCCT CGGCCGCGAC AAGGCGGGCA AGATCTGGTA TCGCACGCTC
ACCGTGTACC TGACCACCAA CTCCAGCTAC CCGGGCGCGC GTCGCGCGTC GATCCAGGCG
GCGAACGATC TGTACGGCGT GAATTCGCTC GAGAGCGCAA CGGTCGCGCG CGCGTGGAGC
GCCGCCGGCG TGAACTGA
 
Protein sequence
MLAVNAFSII NAVIHYLGDY MKKLSCLLSV TAISLACLSA FAQADDPPAA ADRALQLIRQ 
NPSAFHLAAG SAARTLKFAG AQAKAPADGD QFQVRDVIVD ADGTEHVRFD RFYAGLPVIG
GDVVVHSNQG QLKQASLTQP APIDLAGKIG KVGERFVVRN APDVGADAAR RVASKRFGAD
VRRVDGADLV VFARDAAPTL AYAVRVYGKA TDAHGEAVIY YVDARTGNVL DAQDLIKTAS
VTGTGRSLYY GNLSLTTDQT GTNAYRMLDP TRGSGSVYDG RGLSSDEVEQ ASDLPIFTSS
TNVWGNNTTS DRQTVAADID YGLALTWDYY KTTHNRNGIF NDGRGVRSYA HVVFDTGSGT
TGANAAWLSS RVMVYGDGEP GTRLPKPVVS VDVAGHEMSH GVTEATSNLY YSGDAGGLNE
STSDIFGTLV KYYANNPNDP GNYVIGARIT SGGLRKMYKQ DLDGRSYSCY PSGGFSWANP
RHDPHYTSGV GNRFFYLLAE GPVAPSTDTG LSRSQLVCNG DTGFSGLGRD KAGKIWYRTL
TVYLTTNSSY PGARRASIQA ANDLYGVNSL ESATVARAWS AAGVN