| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A2094 |
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| Symbol | |
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| ID | 4905529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | + |
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| Start bp | 2055946 |
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| End bp | 2056893 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640145199 |
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| Product | YscJ/HrcJ family type III secretion apparatus lipoprotein |
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| Protein accession | YP_001076127 |
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| Protein GI | 126456880 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4669] Type III secretory pathway, lipoprotein EscJ |
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| TIGRFAM ID | [TIGR02544] type III secretion apparatus lipoprotein, YscJ/HrcJ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGAT TCGTCTCTTT CTCGCTGCTG CCGGCGCTGC TGCTGCTCGC CGCATGCAAC
CAGCAGGAGT TGCTGAAGAA CCTGACCGAG CAGCAGGCGA ACGACGTCGT CGCGGTGCTC
CAGGCGCACG ATCTCGCCGT GCGCAAGGAG GACCTCGGCA AGACCGGCTA TGCGGTGAGC
GTCGAGCAGG CCGACTTTCC GACCGCCGTC GATCTGCTGC GGCAATACAA CCTGCCGTCG
CAGGCGCGCG TGCAGATCGC GCAGGCGTTT CCCGCCGACT CGCTCGTCGC GTCGCCGCAG
GCCGAGCAGG CGAGGTTGCT GTCGGCCGTC GAGCAGCGCC TCGAGCAGAA TCTCGCCGCG
CTGCAGAACG TCGTGAGCGC GCGCGTGCAG GTGAGCTATC CGCTCAAGCC CTCCGACAGC
GGCAAGCCAG ACGCGCGGAT GCACGTGGCC GCCCTGCTCA CCTATCGCAA CGACGTGAAC
GCGGACATCC TCGTGAGCGA AGTGAAGCGG TTCGTGAAGA ACAGCTTCAC GAACATCGAT
TACGACGACA TCTCGGTGAT CCTGTATCGC GCGCCGTCGC TGTTCCGAGG CGCACCGACG
ATGCCCGCGT CGCATGCGGG CGGCGCGTGG CTCGCCTGGC TCGCGGCGAT TCCGGTCGCG
CTCGCGGCCG CCGCCGCGGG CGGGCTCGCC TACCTGCGCC GCCGGCGCGC CGGCGGCTCC
GATACGCCGG CTCACGCGGC GCCGCGCGCC GAACCCGCGG CGCCGGCCGG CCCCGATGCA
CGCGAGACGA CCGAGGTGCC GCCCCCGGGC GACGCATTCG ACATATCCGA TGCATCGGAC
GCCTTCGATG CATCCGGCAC GTCCGCCTCG CCCGGCGCGG CCGCGGACGC CGCTGCGGCC
GACGCGCCGG GCGCATCGCG CGGCGCGCCG TGGGAGCCGC GCCGATGA
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| Protein sequence | MKRFVSFSLL PALLLLAACN QQELLKNLTE QQANDVVAVL QAHDLAVRKE DLGKTGYAVS
VEQADFPTAV DLLRQYNLPS QARVQIAQAF PADSLVASPQ AEQARLLSAV EQRLEQNLAA
LQNVVSARVQ VSYPLKPSDS GKPDARMHVA ALLTYRNDVN ADILVSEVKR FVKNSFTNID
YDDISVILYR APSLFRGAPT MPASHAGGAW LAWLAAIPVA LAAAAAGGLA YLRRRRAGGS
DTPAHAAPRA EPAAPAGPDA RETTEVPPPG DAFDISDASD AFDASGTSAS PGAAADAAAA
DAPGASRGAP WEPRR
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