Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A2064 |
Symbol | icsB |
ID | 4906365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | - |
Start bp | 2028080 |
End bp | 2029618 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640145170 |
Product | virulence protein IcsB |
Protein accession | YP_001076098 |
Protein GI | 126456466 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.812117 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAATG TCGGTGCATT CGTCGCAAGC GCGCGATCCG GCGCGCGTGT CGTCGTCGGC GGCGACGCGC GCGGCCCGGT GGTGTCGGCC GCGAGGTTGG GGATGAAGGA GCGGTTGTTC GCGTTTCTCG CGCACGTGCC GCTGCTCAAG CACTGCGATG CGGTGCGGCG CTATGCGGAG CAGGTTCGCA TGGAAAACCG CCGCTCGCTC GAGGTGTTCG TGCTCGCGCT GTCGAAGCGA TATGGCCCGG AAGGCGCGAA GGCGGCGTTC GACTACGGCG CGCGGCGCGA CGGCGCGCCG CTCGATCAGC GGCGCGTGCG CAACATGGTG TCGATCGCCG AGCACTTCCA CGGCACGGGC GACGCGAAGC CGCTCGCCCG GCAAATGGTA TTTCGGTCGT GGGAATGCCG GGGGCTCGAT CATCCGGGGC ACGCGTCGCT GACGATCAAG AATCAGGCGG ACGCCGATGC CGGCCGGCAC GTGTACGAGC ACGTCAGTTG GTGGCCGAAT CAACGACTGG GTAGTAAGGA GCATTTCGAT CGCATCAAGC CGAAGACGCT GGACGGCTAT CGGATCGACA AGCGCTCGGA GATTTCGAGC GCGACGGAAC AGAGGCTTCG CGAAGGCGAC GCGGCGAGGA GAAAGATCCT CGCGGACGGC TTCAAATACG CGAATCAGGA CGAGCGTTAC GACGCGCGGT TTTTTCCGAG AGCCGGCCAG AAGTTGGACA AGGATGCCGA ATGGGGGCTG AGCGCGCGCA AGGTCTATTT TCCGGCGATC GGATTCAACC ACGACAGGCG CGATACGGAC CGCCCGCGCG CGTTCGTGCT GTTCGGGCTG AACGAGGCGG CGATGTTGCG CGATGCGCGC ACCGTGAAGG AAGGCGCGAA GTCAGGCGAG CTCAAGTATC GAATGATCAG CAAGAAGGAA AACTGCGCAT CGATGGCGCT GCGCGTGCTG CGCGCCGGCG GCGCCGAGCA TTTCGTGCCG TATACGGCCG CATGGATCTC CGAGGATCCG AATCACGCGC ACGCCTATGC GCTGGCCGTG CAGGCGAGGA TCGACGCGCT GAACCAGCGG CGTGCCGACG TCGAGCGCCG CTGCGAGCGG TTGCGCGACA GCGCATCGGT GCGGCAGGCG TGGCGCGCGT TCTCCGAGGC CGGCGGTGCC TCGGCAAGCC CGCTCGCGGA GGACGCCGGC CGCGGGCGAG CATCGGCGCA CATGCGGCAG GCGCGGCTCG ACGAGCATGC GCGCGAGGTC GAGCGAATCG GCGCGTATTT CGCCGAGCTG TCCGCCGGGC GATCCGGCAA GCATCGCGAT CGGGCGGATG CGGCTCTGGC CGATGCGATG AAGCGTTGCG CGCCTTCGGC TCGCGACGAC GTCGCGGCGC TGACGCGCAA GGCGAGCGTG CTCGTCGAGA CGCTCGGCCG GCATCTCGAC GCGCCGCCGC CGAGCGATTC GTCCGCGCTG AGGAGGCTGG CCGCGCACGC GATGATCGGC CGGATCGAGG CGTTCATGGC GGCTGCGATC GCCGCCTGA
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Protein sequence | MINVGAFVAS ARSGARVVVG GDARGPVVSA ARLGMKERLF AFLAHVPLLK HCDAVRRYAE QVRMENRRSL EVFVLALSKR YGPEGAKAAF DYGARRDGAP LDQRRVRNMV SIAEHFHGTG DAKPLARQMV FRSWECRGLD HPGHASLTIK NQADADAGRH VYEHVSWWPN QRLGSKEHFD RIKPKTLDGY RIDKRSEISS ATEQRLREGD AARRKILADG FKYANQDERY DARFFPRAGQ KLDKDAEWGL SARKVYFPAI GFNHDRRDTD RPRAFVLFGL NEAAMLRDAR TVKEGAKSGE LKYRMISKKE NCASMALRVL RAGGAEHFVP YTAAWISEDP NHAHAYALAV QARIDALNQR RADVERRCER LRDSASVRQA WRAFSEAGGA SASPLAEDAG RGRASAHMRQ ARLDEHAREV ERIGAYFAEL SAGRSGKHRD RADAALADAM KRCAPSARDD VAALTRKASV LVETLGRHLD APPPSDSSAL RRLAAHAMIG RIEAFMAAAI AA
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