| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A2040 |
|---|
| Symbol | |
|---|
| ID | 4906230 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | + |
|---|
| Start bp | 2012829 |
|---|
| End bp | 2016833 |
|---|
| Gene Length | 4005 bp |
|---|
| Protein Length | 1334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 640145145 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001076073 |
|---|
| Protein GI | 126458165 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3523] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGATCG CGCGGATCGC CGCGCTGCTC GCGCTCGCCG CGCTCAGTTG GGCGAGCGCG
CTCTATTTCG ACTGGCCGCT GTGGTGCGCG CCCGCCGTGT TCTGCGCGGC GCTCGCCGGA
TGGCTGCTGT GCCGCGTCGC GCGCCGCGCG CTGCGCGCGG TTCGTGCGCG CGCGCAGCTC
GCACGGCTCG ACGCATCCGA GCGCCTGCCC GCGGCCGACG CGCCGGAGCT GCGCGTCGCC
GCGCGCTGGC GCACCGCGCT CGCCGCGCTC GGGCGCGCGC AGCCCGCGCC GCGCCTGCGC
GGCCGGCCGC GCGACGCGCT GCCGTGGTAT CTCGTGATCG GCCCCGAGGG CGCGGGCAAG
ACAACCGCGC TCGCACGCGC GCGCCTCGTG TCGCCGCTGC GGCACGCGCG CGACGACGCG
GCCATCGCGC CGACCGAGGA CTGCGACTGG TGGTGCTTCG ACGACGCGGT CGTGCTCGAT
CTCGCGGGCC GCTTCGCCGC GCCCGGCGCG ACCGACGACG ATCGCCGCGC ATGGCACGCG
CTCCTCGAGC AGCTCGGCCG CGCGCGTGCG CGCCGGGGCG TGAACGGCGT CGTGGTCGCG
ATCGACGCGC CGCGCCTCAT CGAAGCGAGC CGCGATGCGC TGACGATCGA AGGCAGCGCC
ATTCGCGAAC GGCTCGAGCA ACTGATCCGC CTGTTCGACC GGCGCTTTCC GGTGTACGTG
CTCGTCACGC AATGCGACCG GCTCTACGGC TTCGACGAAT GGGCCGCGCA GCTCGCGCCG
GAACAACGCG AGCGCGCGTT CGGCTATCTC GGCGATCACG ACGCGGATGC GTTCGTCGCG
CGCGCGCTCG ACAGCCTCGA CGCACGGCTC GGCGCACTGC GCGTCGCGCT GGCGGCGCGC
GGCGAGCCGC CGTCGCCGCG CGCGCTGATG CTGCCGCACG AACTCGCGTG CCTGCGGCCC
GCGCTCGAGG CGTTCGCACG CGCGGCGTTC GGCCCGAACG TCTATCAGGA AACACCGTAT
CTGCGCGGGC TGCTGTTCGC GAGCGGCCGG CAGGCGGGCG GCGCGCCGTC GCTGACGCTG
CCCGACTGGC TCGACGCCGC GCCGGCGCGC ACGCCCGGCG ATGCGGGCCT GTTCCTGCAC
GACGTGTTCG CGCGCGTGCT GCCGGGCGAG CGCGACGCGT GGCTGCCCGT CGAGCGGCCG
AGCCGCTCGC GGCTCGTGCT GCGGCGCCTC GCGCTCGCCG CGTGGCTCCT CGCGAGCATC
GCGGCCGGGC TGCTGATGAG CGCATCGTTC GTCGGCGACA TGCGAACCGT CGAGCTGGTC
CGCCGCGACT ATCCCGCGCA TCCGCGCTTC ACCGGCGAAT TCGCGCACGA CACGGCGACG
CTCGAGCGGA TCGGCCGCGT GATCGCCGAC GTCGAGCGGC GCGACGAGCG GCGGCTCGTG
CGCCCGCTCG CCGGCGCGAC GCCCGTCGGC CGGCTCGAAG CGGAACTCAA GCGCCGCTAC
GTCGCGCACT ATCGGCGCTC GATCGAACCC ACCGCCGATC GGCTGTTCTT CGGCGAGCCG
GACGGCGCGA GCGACGTGCG CGCGGCCGAC GATGCGCGGC TCGCCGCGCG CATCCGCAAT
CTGGTCCGCT ACGTGAACCT GATGCAGGCG CGCCGGCGCG GCGCGGATCG CGAGACGCTC
GCGCAAATGC CCGCACCGGC GGTCGCGCGC GCGACGGATG GCGGTGGCGC TCGCGGAGTG
GACAGTGTGG GTGTTTCTGG TGTTTCTGGT GTTTCTGGTG TTTCTGGTGT TTCTGGTGTT
TCTGGTGTTT CTGGTGTTTC TGGCGGTGTA GGCGGTGTAG GCGGTGTAGG CGGTGCGCGC
GCCGCGGAAG GCGCGGGTCG CGCCGTCCGC GCGAGCGGCG GACGGCGCGC AGGCGACGCG
CGCGCCGCGC GCGGCATGCG CGGCGCCGCC GGCAACGCCG GCGCCGGCGC TGAAATCGCA
CCCGCCGCAG ACGGCGTTCG CGATCGCGAC GAAGGGTTCG CGCGCGTCAG CGCGCTCGCC
GTCGACCTGA TCGCGTGGAG CGCGCCCGAC GATCGCGCGC TCGCCGCGCG CGTCGCGGCC
GCGCAGGCAG AGCTCGAACG GCTCGCGTAC CGCGATCCGG ACGGCGCGTG GCTGCTCGCG
CTGCCGGATG CCTCGATGCC GCGCGACGTG ACGCTCGCCG ATTTCTGGCC CGCCGCCGAG
CCGCGCACGC TGCCCGACGC ACAGCCCGCC GCGCTGCGCG ACGTGCGCGT GCCCGCCGCG
CTGACGGCCG CGCATCGCCC GGCCATCGAT GCGTTCCTCG ACGAGATGGC GCAGGCGGTC
GCGAACCGGC CGAAGTTCGC GTTCCATCGC GACGCGTTCG ACACGTGGTA CCGCGCACGG
CGCATCGACG CATGGCGCGA CTTCGTCGCA CGCTTCCCGC AGGGCGAGCA AGGGCTGACG
ACGCAAGCGC AATGGCGCGC GGTGATCGAC CGGATCGCCG ATCGCCGCGA TCCGTTCGCG
GCATTGCTCG CGCGCGTCGA TCGCGAATTC GAATCCGAGC GCGACGACAC GCTGCCGCCG
TGGCTACGGT TCGTGCGCAC GACATCGCAC ATGCTCGCCC CCGCGATGCT CGCGCCCGCG
CGCCTGCCCG CGGCGAGCGG CGGCCTGGGC GCCGCGCTCG GCTCGATCTC GCGCAGCGGC
GGACGCGCGC TGCGCGAAGC GCTCGGCGGC GCGCCCGAGC AAGGCAGGCT CACGCTCGAG
CGCGATGCCG CGCTGCGCGA CGCGCTTGTC GACTACGAGC GGCGCGTCGC CGCGCTCGCC
GCCGATGCGC TTGCGGGCCC CGGCGCCGCG TACCGGCTCG CGGCCGATTT CCACGGCTTC
GGCGTCGATC CGTCCGTCCA GGCTTCCGCG ATGCGCGCGG CCGACAGCGC GCTGCGCGAC
GTCAAGCGGC TCGCGGGCGA TCGCGACGTC GGCGGCGACG TCGTCTGGAG CCTCGTCGGC
GGCCCGCTGC GCGCGCTGAT CGCGTATGTC GAGCGGCAGG CGTCGTGCGC GCTGCAGGAC
GACTGGGAGC GCGACGTGCT GTGGCCGCTC AGGCGCGCGG CGACGCGCGA CGACGTGGAG
GGTCTGCTGT ACGGCCCGCA AGGCGCGATC TGGGCGTTCG TCGACGGCCC GGCGAAGCCG
TTCGTGCGTG TCGGCGCGGC GCGTGCATCG GCGCTCGACA CGCTCGGCTA CCGGCTGCCG
TTCACCGACG CGTTCCTGCC GCTCATCGAC GACGCGGCCG CCCGGCGCGT CGCGCAAGCG
CGGCGCGACG CCGAGCGGCG CGCGCAACAG CAGGCGGCGC TCGAGCTGGA CGAGCGGATC
GCATCGCTCG GCAAGCAGAT CGACGCGCTG CGCGCGCAAA CGGTGCGCTT CGGGATCGTC
GCGCAGCCGA CCGACGTGAA CCCGGATGCG CAGGCCAAGC CGTTCGAAAC CGTGCTGACG
CTGCAATGCG CGCCGCAGGC GCGCACGCTG ACGAACTACA ACCTGCGCGT GTCCGAGCAG
ATCGACTGGC AACCCGATCG ATGCGGCGAC GCGACGCTGC GCATCTCGCT CGGCGGCGTC
ACGCTCGTGC GCCGTTACGC GGGATCGCTC GGCGTCGCGC GCTTCGTCCA GGACTTCCGC
TACGGCGTGC GCCGCTTCAC GCCCCGCGAT TTCCCGGACG CGAAAGCGCA GCTTCAACGT
CTCGGCGTGC GCCACATCGA CGTGCGTTAC GACTTCTCCG GGCATGACGC GCTGCTCGCG
CACGTCGGTC GGATCGACGC GCTCGAACGC GCGCGCCGCG ACGACCTCGC GCGGCAGCGG
CGCGCCGCGA ACCGGCAGGA CGACGACGCG GGCGGCGCGA CGGCGATCGC GCGGGCGGCG
GCGTCCGTCG CGAATGCGCC GGGCGCCGCG CTGCCCCGCC GCATCGGCGT GTGTTGGGGG
GACCCGGCGC ACGACAGGCC CGATGGCGAC GGCGCGCAAC CGTGA
|
|---|
| Protein sequence | MMIARIAALL ALAALSWASA LYFDWPLWCA PAVFCAALAG WLLCRVARRA LRAVRARAQL
ARLDASERLP AADAPELRVA ARWRTALAAL GRAQPAPRLR GRPRDALPWY LVIGPEGAGK
TTALARARLV SPLRHARDDA AIAPTEDCDW WCFDDAVVLD LAGRFAAPGA TDDDRRAWHA
LLEQLGRARA RRGVNGVVVA IDAPRLIEAS RDALTIEGSA IRERLEQLIR LFDRRFPVYV
LVTQCDRLYG FDEWAAQLAP EQRERAFGYL GDHDADAFVA RALDSLDARL GALRVALAAR
GEPPSPRALM LPHELACLRP ALEAFARAAF GPNVYQETPY LRGLLFASGR QAGGAPSLTL
PDWLDAAPAR TPGDAGLFLH DVFARVLPGE RDAWLPVERP SRSRLVLRRL ALAAWLLASI
AAGLLMSASF VGDMRTVELV RRDYPAHPRF TGEFAHDTAT LERIGRVIAD VERRDERRLV
RPLAGATPVG RLEAELKRRY VAHYRRSIEP TADRLFFGEP DGASDVRAAD DARLAARIRN
LVRYVNLMQA RRRGADRETL AQMPAPAVAR ATDGGGARGV DSVGVSGVSG VSGVSGVSGV
SGVSGVSGGV GGVGGVGGAR AAEGAGRAVR ASGGRRAGDA RAARGMRGAA GNAGAGAEIA
PAADGVRDRD EGFARVSALA VDLIAWSAPD DRALAARVAA AQAELERLAY RDPDGAWLLA
LPDASMPRDV TLADFWPAAE PRTLPDAQPA ALRDVRVPAA LTAAHRPAID AFLDEMAQAV
ANRPKFAFHR DAFDTWYRAR RIDAWRDFVA RFPQGEQGLT TQAQWRAVID RIADRRDPFA
ALLARVDREF ESERDDTLPP WLRFVRTTSH MLAPAMLAPA RLPAASGGLG AALGSISRSG
GRALREALGG APEQGRLTLE RDAALRDALV DYERRVAALA ADALAGPGAA YRLAADFHGF
GVDPSVQASA MRAADSALRD VKRLAGDRDV GGDVVWSLVG GPLRALIAYV ERQASCALQD
DWERDVLWPL RRAATRDDVE GLLYGPQGAI WAFVDGPAKP FVRVGAARAS ALDTLGYRLP
FTDAFLPLID DAAARRVAQA RRDAERRAQQ QAALELDERI ASLGKQIDAL RAQTVRFGIV
AQPTDVNPDA QAKPFETVLT LQCAPQARTL TNYNLRVSEQ IDWQPDRCGD ATLRISLGGV
TLVRRYAGSL GVARFVQDFR YGVRRFTPRD FPDAKAQLQR LGVRHIDVRY DFSGHDALLA
HVGRIDALER ARRDDLARQR RAANRQDDDA GGATAIARAA ASVANAPGAA LPRRIGVCWG
DPAHDRPDGD GAQP
|
|---|
| |