| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A2039 |
|---|
| Symbol | |
|---|
| ID | 4905460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1106a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009078 |
|---|
| Strand | + |
|---|
| Start bp | 2012152 |
|---|
| End bp | 2012817 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640145144 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001076072 |
|---|
| Protein GI | 126457277 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3455] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.353625 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTGA CCGATTCGAT GATGCCGCTC GTCGCGTATG CGCGGCAGCT CGCGCAATCG
CCGCGCGGCG ACGCCGCCGA AGTCGCGCTG CGGCTCGACA TCCTGATCGA GCGCGCGCGC
GACCACGCGG CGTGCGCGGG CGCACCCGCG GCCGACGTCG ACGACGCGCT GTTCGCGGTG
TGCGCGTGGA TCGACGAGGC GCTGCTGAAC AGCGGCTGGG ACGATGCCGA TCGCTGGACG
CTGCGGCTGC TGCAAAAGCG CTACTTCGAT ACGTCGCACG CGGGCGTCGT GTTCTTCGAA
CGCCTCGGCA CGCTCGACGG CGCGCGCGCG AGCGTGCTCG AGGTCTACCT GCTGTGCCTG
CGGCTCGGCT TTCGCGGCCG CTACGGCTAC GACGGCGGCG ACGGCCCGCT CGACGCGATC
CGCCAGCGCG CGCTCGATGC ACTGTCGGCG CACGCGCCGC CGTGCGCCGC GGGCGAGCCG
CCGTTTCCCG CCGCCTATGC GCACGCCGGC CCGCACGCCG CCGCCGCGAA AGCGCGCACG
CGCCGCCGGA TCGCGCGCGC GGGGCTGAGC GTCGGGCTGC CGCTCGCCAT CCTGCTGTCG
CTCTATCTGA TCTATCACGT CGTCATCGTG CGGATGGTCG ACGCGGTGTA CCCCAGGCTG
CAATGA
|
|---|
| Protein sequence | MKLTDSMMPL VAYARQLAQS PRGDAAEVAL RLDILIERAR DHAACAGAPA ADVDDALFAV
CAWIDEALLN SGWDDADRWT LRLLQKRYFD TSHAGVVFFE RLGTLDGARA SVLEVYLLCL
RLGFRGRYGY DGGDGPLDAI RQRALDALSA HAPPCAAGEP PFPAAYAHAG PHAAAAKART
RRRIARAGLS VGLPLAILLS LYLIYHVVIV RMVDAVYPRL Q
|
|---|
| |