Gene BURPS1106A_A2014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_A2014 
Symbol 
ID4904645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009078 
Strand+ 
Start bp1981744 
End bp1982358 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content69% 
IMG OID640145119 
ProductSCO1/SenC family protein 
Protein accessionYP_001076047 
Protein GI126456996 
COG category[R] General function prediction only 
COG ID[COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.0132018 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTCG ATTATTTCAC CGCGCGCGGC GCGCTCGCCC TGCTCGCCGC CGCGTGCGTG 
GCCACGGCGG CGCACGGCGC GGACGCGCCC GCCGCCGCGG CCACGCCGCC TGCCGCGACG 
GCAACCGATT CGCTGTATCA GGCGAACGCG ACGCTGACCG ATCAGGACGG CAAAACATTC 
CGCCTCGCCG ATCTGCGCGG CACGCCGACG CTCGTCAGCA TGTTCTACAC CTCGTGCAAG 
ATGGTGTGCC CGATGCTGTT CGAGACGATC GGACTCACGC TCGACGCGGG CGGCGAGCCC 
GCTCGCAAGC GCATCAAGGT CGTCGCGGTC ACGGTCGATC CCGATCGCGA TTCGGTCGCG 
GTCTTGCGCA AGACCGCGAA CGCGCACGGC CTCGACGCGC GCTGGCGGCT CGCGCGCACC 
GACCGCGACA GCACGCGCAC CGTCGCCGCG CTGCTCGGCA TTCAGTACCG CAAGCTCGCG 
AGCGGCGAAT TCAATCATTC GAGCACGATC GTGCTGCTCG ACGCGGACGG CCGCATCGTC 
GCGCATACGA ACACGCTCGG CGAAACCGAT CCCGCGTTCG TCGACGCGAT GCGCAAGCAG 
CTCGCCGCGC AGTAA
 
Protein sequence
MKLDYFTARG ALALLAAACV ATAAHGADAP AAAATPPAAT ATDSLYQANA TLTDQDGKTF 
RLADLRGTPT LVSMFYTSCK MVCPMLFETI GLTLDAGGEP ARKRIKVVAV TVDPDRDSVA 
VLRKTANAHG LDARWRLART DRDSTRTVAA LLGIQYRKLA SGEFNHSSTI VLLDADGRIV 
AHTNTLGETD PAFVDAMRKQ LAAQ