Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1106A_A2001 |
Symbol | rspA |
ID | 4906090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1106a |
Kingdom | Bacteria |
Replicon accession | NC_009078 |
Strand | + |
Start bp | 1969129 |
End bp | 1970337 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640145107 |
Product | starvation sensing protein RspA |
Protein accession | YP_001076035 |
Protein GI | 126456057 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAATCG AACGGCTGAA CATCATCGTC ACCTGCCCCG GCCGGAATTT CGTGACGGTC AAGATCGTCA CCGACGAAGG CGTCCACGGC CTCGGCGACG CGACGCTCAA CGGGCGCGAG CTCGCGGTGC GCGCGTATCT GGAGGATCAC GTGTTCCCGT GCCTGATCGG CCGGGACCCG CGCGACATCG AGGACATCTG GCAATACCTG TATCGCGGCG CGTACTGGCG GCGCGGGCCC GTGACGATGA CGGCGATCGC CGCGATCGAC ATGGCGCTCT GGGACATCAA GGGCAAGCTC GCCGGCATGC CCGTCTATCA GTTGCTCGGC GGCAAGAGCC GCGAAGGGCT GATGGTCTAC GGCCACGCGA ACGGGCGCGA TCACGACGAG GCGATCGACG CCGCGCACCG GCACATCGCC GCGGGCTACC GCGCGATCCG CGTGCAGTCG GGCGTGCCGG GGCTGGCGAA GGTGTACGGC GTCGGCAAGA CGGCGGGCGC GTACGAGCCC GCCGAAAAAG GCCTGCCGCC CGAGGAGCCG TGGGACACCG CGCTCTACCT GCGCCATACG CCCGAGCTGT TCCGCAAGGT GCGCGACGCG CTCGGCGACG CGCCGCACCT GCTGCACGAC GCGCATCACC GGCTCACGCC GATCGAGGCG GCGCGCCTCG GCCGCGATCT CGAGCCGTAC CGGCTGTTCT GGCTCGAGGA CGCGACGCCC GCCGAGAACC AGGACGCATT CCGGCTGATC CGCAGCCACA CGACGACGCC GCTCGCGGTC GGCGAGGTCT TCAATTCGAT CTGGGATTGC AAGGACCTGA TCCGCGATCA GCTGATCGAC TACATCCGCG CGACGATCGT GCACGCGGGC GGCATCACGC ACGTGCGCCG CATCGCCGAT TACGCGGCGA TGTACCAGGT CCGCACGGGC TTTCACGGCG CGACCGACCT GTCGCCCGTG TGCATGGCGG CCGCGGTGAA CTTCGGACTG TGGGCGCCGA ACTTCGGCAT CCAGGAGCTG ATGCCGCACA CGGCGCTGAC CGACGAGGTG TTCCCGCACA ACTATCGCTT CGACGACGGC TATCTCGTGA TGGACGACGT GCCCGGCCTC GGCGTCGACA TCGACGAGAC GCTCGCCGCG AACTATCCGT ACGAGCGCGC CTACCTGCCC GTCGCCCGCC TGCGCGACGG CTCGATGTGG AACTGGTGA
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Protein sequence | MKIERLNIIV TCPGRNFVTV KIVTDEGVHG LGDATLNGRE LAVRAYLEDH VFPCLIGRDP RDIEDIWQYL YRGAYWRRGP VTMTAIAAID MALWDIKGKL AGMPVYQLLG GKSREGLMVY GHANGRDHDE AIDAAHRHIA AGYRAIRVQS GVPGLAKVYG VGKTAGAYEP AEKGLPPEEP WDTALYLRHT PELFRKVRDA LGDAPHLLHD AHHRLTPIEA ARLGRDLEPY RLFWLEDATP AENQDAFRLI RSHTTTPLAV GEVFNSIWDC KDLIRDQLID YIRATIVHAG GITHVRRIAD YAAMYQVRTG FHGATDLSPV CMAAAVNFGL WAPNFGIQEL MPHTALTDEV FPHNYRFDDG YLVMDDVPGL GVDIDETLAA NYPYERAYLP VARLRDGSMW NW
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