Gene BURPS1106A_A2001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_A2001 
SymbolrspA 
ID4906090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009078 
Strand
Start bp1969129 
End bp1970337 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content69% 
IMG OID640145107 
Productstarvation sensing protein RspA 
Protein accessionYP_001076035 
Protein GI126456057 
COG category[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAATCG AACGGCTGAA CATCATCGTC ACCTGCCCCG GCCGGAATTT CGTGACGGTC 
AAGATCGTCA CCGACGAAGG CGTCCACGGC CTCGGCGACG CGACGCTCAA CGGGCGCGAG
CTCGCGGTGC GCGCGTATCT GGAGGATCAC GTGTTCCCGT GCCTGATCGG CCGGGACCCG
CGCGACATCG AGGACATCTG GCAATACCTG TATCGCGGCG CGTACTGGCG GCGCGGGCCC
GTGACGATGA CGGCGATCGC CGCGATCGAC ATGGCGCTCT GGGACATCAA GGGCAAGCTC
GCCGGCATGC CCGTCTATCA GTTGCTCGGC GGCAAGAGCC GCGAAGGGCT GATGGTCTAC
GGCCACGCGA ACGGGCGCGA TCACGACGAG GCGATCGACG CCGCGCACCG GCACATCGCC
GCGGGCTACC GCGCGATCCG CGTGCAGTCG GGCGTGCCGG GGCTGGCGAA GGTGTACGGC
GTCGGCAAGA CGGCGGGCGC GTACGAGCCC GCCGAAAAAG GCCTGCCGCC CGAGGAGCCG
TGGGACACCG CGCTCTACCT GCGCCATACG CCCGAGCTGT TCCGCAAGGT GCGCGACGCG
CTCGGCGACG CGCCGCACCT GCTGCACGAC GCGCATCACC GGCTCACGCC GATCGAGGCG
GCGCGCCTCG GCCGCGATCT CGAGCCGTAC CGGCTGTTCT GGCTCGAGGA CGCGACGCCC
GCCGAGAACC AGGACGCATT CCGGCTGATC CGCAGCCACA CGACGACGCC GCTCGCGGTC
GGCGAGGTCT TCAATTCGAT CTGGGATTGC AAGGACCTGA TCCGCGATCA GCTGATCGAC
TACATCCGCG CGACGATCGT GCACGCGGGC GGCATCACGC ACGTGCGCCG CATCGCCGAT
TACGCGGCGA TGTACCAGGT CCGCACGGGC TTTCACGGCG CGACCGACCT GTCGCCCGTG
TGCATGGCGG CCGCGGTGAA CTTCGGACTG TGGGCGCCGA ACTTCGGCAT CCAGGAGCTG
ATGCCGCACA CGGCGCTGAC CGACGAGGTG TTCCCGCACA ACTATCGCTT CGACGACGGC
TATCTCGTGA TGGACGACGT GCCCGGCCTC GGCGTCGACA TCGACGAGAC GCTCGCCGCG
AACTATCCGT ACGAGCGCGC CTACCTGCCC GTCGCCCGCC TGCGCGACGG CTCGATGTGG
AACTGGTGA
 
Protein sequence
MKIERLNIIV TCPGRNFVTV KIVTDEGVHG LGDATLNGRE LAVRAYLEDH VFPCLIGRDP 
RDIEDIWQYL YRGAYWRRGP VTMTAIAAID MALWDIKGKL AGMPVYQLLG GKSREGLMVY
GHANGRDHDE AIDAAHRHIA AGYRAIRVQS GVPGLAKVYG VGKTAGAYEP AEKGLPPEEP
WDTALYLRHT PELFRKVRDA LGDAPHLLHD AHHRLTPIEA ARLGRDLEPY RLFWLEDATP
AENQDAFRLI RSHTTTPLAV GEVFNSIWDC KDLIRDQLID YIRATIVHAG GITHVRRIAD
YAAMYQVRTG FHGATDLSPV CMAAAVNFGL WAPNFGIQEL MPHTALTDEV FPHNYRFDDG
YLVMDDVPGL GVDIDETLAA NYPYERAYLP VARLRDGSMW NW