Gene BURPS1106A_A1988 details

Gene Information

• Locus tag: BURPS1106A_A1988
• ID: 4905394
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009078
• Strand: +
• Start bp: 1957945
• End bp: 1958433
• Gene Length: 489 bp
• Protein Length: 162 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 640145094
• Product: prevent-host-death family protein
• Protein accession: YP_001076022
• Protein GI: 126456192
• TIGRFAM ID: [TIGR01552] prevent-host-death family protein

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.200976
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCATTC GCATCGACGA CATCGTGCCG CTGTCCATCG CACGCGCGCG CTTTTCCGAG 
CTGGCGGACG ACGCGCGGGA CGGCGGCGAG AAGATCATCA CGAAGAACGG CGCGGCGTAT 
GTCGCGCTGA TCGACGCGAG ACGGCTCGAT CACTATCATC GGCTCGAGCG CGAGCGGGCG 
GAATGCGCCT GCGCGGCGCT ACTGCACGGC GGCGGCGGCG ATGGTCGCGA TAGCGACGAT 
AGGGGCAATG GAGGCGACGC AGCCTGTGAC GCAGCCCGCA GCGGCAGACG CGACAGTCCG 
GACGGCCGTG GCGCCGCGAT CGCTGCCGGG CGGGAGACGG GTGCGGCGAA TGCAACGGAT 
GCAACGGGTG CGCCGGGGAC GATGGGCGCG ATGGCTGCAC CGTGCGATAG CGACGGCGCC 
GATGCGCTCG CCCCCGACGC GCTCGCCCCC GATGCGCCGT CGGCCGAGCG GCGCGCCGGA 
CCCGATTGA 

 

Protein sequence

MTIRIDDIVP LSIARARFSE LADDARDGGE KIITKNGAAY VALIDARRLD HYHRLERERA 
ECACAALLHG GGGDGRDSDD RGNGGDAACD AARSGRRDSP DGRGAAIAAG RETGAANATD 
ATGAPGTMGA MAAPCDSDGA DALAPDALAP DAPSAERRAG PD