Gene BURPS1106A_A1946 details

Gene Information

• Locus tag: BURPS1106A_A1946
• ID: 4905803
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009078
• Strand: +
• Start bp: 1904035
• End bp: 1909785
• Gene Length: 5751 bp
• Protein Length: 1916 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 640145052
• Product: putative cell surface protein
• Protein accession: YP_001075980
• Protein GI: 126456867
• TIGRFAM ID: [TIGR03057] X-X-X-Leu-X-X-Gly heptad repeats

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTCCACCG GGCTGTCGAC CGCGAATAGC ACCGTCGCTT CGCTGTCCAC CTCGACTTCG 
ACCGGCCTGA GCTCGGCCAC CAGCTCGATC GCTTCGCTGT CGACTTCCAC GTCAACCGGT 
ATTGGCTCGC TCTCCACCGG CCTGTCGACG ACCAACAGCA ACGTCGCCTC GCTGTCCAGC 
GGCCTGAGCA GCACGAATAG CTCGCTGACC TCGCTGTCGA CTTCAGCTTC GTCCGGCATC 
AGCACCGCGC AGAGCGGTGT CAATTCGTTG TCCACCGGGC TGTCGACCGC GAATAGCACC 
GTCGCTTCGC TGTCCACGTC GACCTCGACC GGTCTGAGCT CGGCCACCAG CTCGATCGCT 
TCGCTGTCGA CTTCCACGTC GACCGGCATC GGCTCGCTTT CCACCGGCCT GTCGACCGTC 
GCGACGACGA CCAACAATCT CGGCAGCAGC ACCGCCGCGG CGCTCGGCGG CGGCGCGACG 
TACAATCCGG CCACCGGCAC GATTTCCGCG CCGTCGTACA CGACGTACAA CGCGAACGGC 
ACGACCACGG CCAACACCAG TGTCGGCTCT GCGATCGACA GCATCAACGC GAACGGCATC 
AAGTACTTCC ATGCGAACTC GACTGGGCCG GACAGCGTCG CGACCGGCGC GGACGCCGTC 
GCGATCGGCA CGGGCGCGAC GGCCGCCACG GCGAACTCGG TCGCGCTCGG CGCGAACTCG 
GTGACGGCCG CGGCCGTCCC GACCAGCAGC GCGACCGTCG GCTCGACCAC GCTCGGTACG 
TTCGCGGGCA GCGCGCCCGT GGGCGTCGTG AGCGTCGGGG CGCCGAGCGC GGAACGCCAG 
ATCACGAACG TCGCCGCCGG CCAGGTCACC GCCAGCAGCA CCGATGCGAT CAACGGCAGC 
CAGCTCTATG CGGTTGCGTC GAAGCTCGAC TCGGCCTCGA GTTCGATTTC GTCGCTGTCG 
ACGGGACTGT CGTCGGCCAC CAGTTCGATT ACTTCGCTCT CCACTTCCAC CTCGACGGGC 
CTGAGCTCGG CGAATAGCTC GATCGCCTCG CTGTCGACCT CCACGTCGAC CGGTATCGGT 
TCGCTCTCCA CCGGTCTGTC CACGACCGAT AGCGCCGTCG CCTCGCTGTC CACCTCGACT 
TCGACCGGCC TGAGCTCGGC CACCAGCTCG ATCACTTCGC TGTCGACTTC CACGTCGACC 
GGCATCGGTT CGCTTTCCAC CGGCCTGTCC ACAACCAACA GCAACGTCGC TTCGCTGTCC 
ACCTCGACTT CGACCGGTCT GAGCTCGGCC ACCAGCTCGA TCGCTTCGCT GTCGACCTCC 
ACGTCGACCG GCATCGGCTC GCTTTCCACC GGTCTGTCCA CGACCAATAG CACCGTCGCC 
TCGCTGTCCA CGTCGACCTC GACCGGCCTG AGCTCGGCGA ATAGCTCGAT CGCCTCGCTG 
TCGACCTCCA CGTCGACCGG CATCGGCTCG CTTTCCACCG GCCTGTCCAC GACCAACAGC 
AACGTCGCCT CGCTGTCCAG CGGCCTGAGC AGCACGAACA GCTCGCTGAC CTCGCTTTCG 
ACTTCAGCTT CGTCCGGCAT CAGCACCGCG CAGAGCGGTG TCAATTCGTT GTCCACCGGG 
CTGTCGACCA CCAATAGCAC CGTCGCTTCG CTGTCCACCT CGACCTCGAC CGGCTTGAGC 
TCGGCCACCA GCTCGATCGC TTCGCTGTCG ACTTCCACGT CGACCGGCAT CGGCTCGCTC 
TCCACCGGTC TGTCCACGAC CGATAGCACC GTCGCTTCGC TGTCCACGTC GACCTCGACC 
GGCCTGAGTT CGGCCACCAG CTCGATCGCT TCGCTGTCGA CTTCCACGTC GACCGGTATC 
GGCTCGCTTT CCACCGGCCT GTCGACCACC AACAGCAACG TCGCCTCGCT GTCCAGCGGC 
CTGAGCAGCA CGAATAGCTC GCTGACCTCG CTGTCGACGT CCGCTTCGTC GGGCATCAGC 
ACCGCGCAGA GCGGCGTCAA TTCGTTGTCC ACCGGGCTGT CGACCGCGAA TAGCACCGTC 
GCTTCGCTGT CCACGTCGAC TTCGACGGGC CTGAGCTCGG CGAACAGCTC GATCGCTTCG 
CTGTCGACTT CCACGTCGAC CGGCATCGGC TCGCTTTCCA CCGGCCTGTC CACGACCGAT 
AGCACCGTCG CCTCGCTGTC CACGTCGACT TCGACCGGTC TGAGCTCGGC GAATAGCTCG 
ATCGCCTCGC TGTCGACCTC CACGTCGACC GGTATCGGCT CGCTGTCCAC CGGTCTGTCC 
ACGACCAACA GCAACGTCGC TTCGCTGTCC ACCTCGACTT CGACGGGCCT GAGCTCGGCG 
AATAGCTCGA TCGCCTCGCT GTCGACTTCC ACGTCGACCG GTATCGGCTC GCTTTCCACC 
GGCCTGTCCA CGACCAACAG CAACGTCGCT TCGCTGTCCA CCTCGACTTC GACGGGCCTG 
AACTTGGCGA ATAGCTCGAT CGCCTCGCTG TCGACTTCCA CGTCGACCAG TATCGACTCG 
CTTTCCACCG GCCTGTCCAC GACCAACAGC AACGTCGCTT CGCTGTCCAC CTCGACTTCG 
ACGGGCCTGA GCTCGGCGAA TAGCTCGATC GCCTCGCTGT CGACTTCCAC GTCGACCGGT 
ATCGGCTCGC TTTCCACCGG CCTGTCCACG ACCAACAGCA ACGTCGCTTC GCTGTCCACC 
TCGACTTCGA CGGGCCTGAA CTTGGCGAAT AGCTCGATCG CCTCGCTGTC GACCTCCACG 
TCGACCGGTA TCGGCTCGCT TTCCACCGGT CTGTCCACGA CCAACAGCAA CGTCGCTTCG 
CTGTCCACCT CGACTTCGAC GGGTCTGAGC TCGGCCACCA GCTCGATCGC TTCGCTGTCG 
ACTTCCACGT CGACCGGCAT CGGCTCGCTC TCCACCGGTC TGTCCACGAC CGATAGCACC 
GTCGCCTCGC TGTCCACGTC GACTTCGACC GGCCTGAGCT CGGCGAACAG CTCGATCGCC 
TCGCTGTCGA CTTCCACGTC GACCGGCATC GGCTCGCTGT CCACCGGTCT GTCCACGACC 
GATAGCACCG TCGCCTCGCT GTCCACGTCG ACTTCGACCG GCCTGAGCTC GGCCACCAGC 
TCGATCACTT CGCTGTCGAC TTCCACGTCG ACCGGCATCG GTTCGCTTTC CACCGGCCTG 
TCCACGACCA ACAGCAACGT CGCTTCGCTG TCCACCTCGA CTTCGACCGG TCTGAGCTCG 
GCCACCAGCT CGATCGCTTC GCTGTCGACC TCCACGTCGA CCGGCATCGG CTCGCTTTCC 
ACCGGTCTGT CGACGACCAA CAGCAACGTC GCTTCGCTGT CCACCTCGAC TTCGACGGGC 
CTGAGCTCGG CCACCAGCTC GATCGCTTCG CTGTCGACTT CCACGTCGAC CGGTATCGGC 
TCGCTTTCCA CCGGCCTGTC CACGACCGAT AGCACCGTCG CTTCGCTGTC CACGTCGACT 
TCGACGGGCC TGAGCTCGGC CACCAGCTCG ATCGCTTCGC TGTCGACTTC CACGTCGACC 
GGCATCGGCT CGCTGTCCAC CGGTCTGTCC ACGACCAACA GCACCGTCGC TTCGCTGTCC 
ACCTCGACTT CGACGGGCCT GAGCTCGGCC ACCAGCTCGA TCGCCTCGCT GTCGACCTCC 
ACGTCGACCG GTATCGGCTC GCTCTCCACC GGCCTGTCCA CGACCGATAG CACCGTCGCT 
TCGCTGTCCA CGTCGACTTC GACCGGCCTG AGCTCGGCCA CCAGCTCGAT CGCTTCGCTG 
TCGACCTCCA CGTCGACCGG TATCGGCTCG CTTTCCACCG GTCTGTCCAC GACCAACAGC 
ACCGTCGCTT CGCTGTCCAC CTCGACTTCG ACGGGCCTGA GCTCGGCCAC CAGCTCGATC 
GCCTCGCTGT CGACCTCCAC GTCAACCGGC ATCGGCTCGC TTTCCACCGG CCTGTCCACG 
ACCAACAGCA CCGTCGCCTC GCTGTCCACG TCGACCTCGA CCGGCATCGG CTCGCTCTCC 
ACCGGCCTGT CCACGACCAA CAGCACCGTC GCGTCGCTGT CCACGTCGAC TTCGACCGGC 
ATCGGTTCGC TGTCCACCGG CCTGTCGTCG ACCAACAGCA ACCTCGTGTC GCTCTCCACG 
TCGGCCTCGA CCGGCATCGG CTCGCTGTCG ACCAGCATCG ACACGACCAA CAGCAACCTC 
GCGTCGCTCT CCACGTCGAG CTCGACCGGC ATCGGCTCGC TGTCGACCAG CATCAACGCG 
ACCAACAGCA ACCTCGCGTC GCTCTCCACG TCCGCCTCGA CCGGCATCGG CTCGCTGTCG 
ACGAGCATCA GCTCGATCAC GACGAACACG ACGAACCTCG GCAACAGCAC CGCCGCGGCG 
CTCGGCGGCG GCGCGACGTA CGATCCGGCC ACCGGCGCGA TCTCCGCGCC GTCGTACACG 
ACGTACAACG CGAACGGCAC CACCGCGACC AACACCAGCG TCGGCGCCGC GATCGACAAC 
ATCAACGCGA ACGGCATCAA GTACTTCCAC GCGAACTCGA CCGATCCGGA CAGCGTCGCG 
ACCGGCACGA ACAGCGTCGC GATCGGCCCG AACGCGGTCG CGAACGTCGA CTACTCGGTC 
GCGATCGGCA GCGGCGCGAC GACCTCGGCG GCCGTGCCCG TCGCGTCGGC GAGCGTCGGC 
GGCCTCACGT TCGGCGGCTT CGCGGGCAGC GCGCCCATCG GCGTGTTCAG CGTCGGCGCG 
CCGGGCGCGG AACGCCAGAT CACGAATGTC GCCGCCGGCC GCATCTCCGC GGCCAGCACC 
GACGCCGTCA ACGGCAGCCA GCTCTACGCG ACCAACAGCA ATGTCGCGTC GCTGTCGACC 
GGTCTGAACG CGACGAACAG CAACCTCGCG TCGCTGTCCA CGTCCACCTC GACCGCCGTC 
GGCTCGCTGT CCACCGGCCT GTCCACGACC AACAGCACCG TCGCCTCGCT GTCCACGTCG 
ACCTCGACCA GCATCGGCTC GCTGTCCACC GGCCTCTCGA CCGCGAACAG CAACCTCGCG 
TCGCTGTCCA CGTCCACCTC GACCGGCATC GGCTCGCTGT CCACCGGCCT CGCGACGACC 
AACAGCAATG TCGCGTCGCT GTCGACGAGC GTGACCAACA TCAACACGCA GCTCACGTCG 
CTGTCGACGT CGATCACGAA CAACGTGATC CGGTCGCTGC CCGCGAGCAC CGGCGTCGCC 
GCGGACATGA GCGCGCCGAA GGCGACCTCG CCGTCCGTCA CGGCCGGCTC GAACTCGGTC 
GCGCTCGGCG CGGGCTCGAA CGACGGCGGT CGCTCGAACG TCGTGTCGGT GGGCAGCGAC 
ACGCAGCAGC GCCAGATCAC GAACGTCGCG GCCGGCACCG AGGGCACCGA CGCGGTCAAC 
GTCAACCAGT TGAATACGCT GTCGACGTCG ATGTCGCAAT CGCTGTCGAA TCAGCAGACG 
CAGCTCAACA ATCTCGGCTC GCAACTGAAC CAGACGCAGC AGCAACTGCA GCAGACCGAC 
ACGATGGCCC GCCAGGGGAT CGCGGCGGTC GCGGCGATGG CGTCGATTCC GCACATGGAC 
CGCGACTCGA ACTTCGCGAT GGGCGTGGGC ACCTCTTCGT TCCTCGGCCA GAAGGCGATC 
GCGGTCGGCA TGCAGGCGCG CATCACCGAG AACCTGAAGG CGTCGCTGAA CGGCGGCTTC 
GCCGGCAATC AGAAGGTCAT CGGCGCGGGC ATGCTCTATC AGTGGAAGTA A 

 

Protein sequence

MSTGLSTANS TVASLSTSTS TGLSSATSSI ASLSTSTSTG IGSLSTGLST TNSNVASLSS 
GLSSTNSSLT SLSTSASSGI STAQSGVNSL STGLSTANST VASLSTSTST GLSSATSSIA 
SLSTSTSTGI GSLSTGLSTV ATTTNNLGSS TAAALGGGAT YNPATGTISA PSYTTYNANG 
TTTANTSVGS AIDSINANGI KYFHANSTGP DSVATGADAV AIGTGATAAT ANSVALGANS 
VTAAAVPTSS ATVGSTTLGT FAGSAPVGVV SVGAPSAERQ ITNVAAGQVT ASSTDAINGS 
QLYAVASKLD SASSSISSLS TGLSSATSSI TSLSTSTSTG LSSANSSIAS LSTSTSTGIG 
SLSTGLSTTD SAVASLSTST STGLSSATSS ITSLSTSTST GIGSLSTGLS TTNSNVASLS 
TSTSTGLSSA TSSIASLSTS TSTGIGSLST GLSTTNSTVA SLSTSTSTGL SSANSSIASL 
STSTSTGIGS LSTGLSTTNS NVASLSSGLS STNSSLTSLS TSASSGISTA QSGVNSLSTG 
LSTTNSTVAS LSTSTSTGLS SATSSIASLS TSTSTGIGSL STGLSTTDST VASLSTSTST 
GLSSATSSIA SLSTSTSTGI GSLSTGLSTT NSNVASLSSG LSSTNSSLTS LSTSASSGIS 
TAQSGVNSLS TGLSTANSTV ASLSTSTSTG LSSANSSIAS LSTSTSTGIG SLSTGLSTTD 
STVASLSTST STGLSSANSS IASLSTSTST GIGSLSTGLS TTNSNVASLS TSTSTGLSSA 
NSSIASLSTS TSTGIGSLST GLSTTNSNVA SLSTSTSTGL NLANSSIASL STSTSTSIDS 
LSTGLSTTNS NVASLSTSTS TGLSSANSSI ASLSTSTSTG IGSLSTGLST TNSNVASLST 
STSTGLNLAN SSIASLSTST STGIGSLSTG LSTTNSNVAS LSTSTSTGLS SATSSIASLS 
TSTSTGIGSL STGLSTTDST VASLSTSTST GLSSANSSIA SLSTSTSTGI GSLSTGLSTT 
DSTVASLSTS TSTGLSSATS SITSLSTSTS TGIGSLSTGL STTNSNVASL STSTSTGLSS 
ATSSIASLST STSTGIGSLS TGLSTTNSNV ASLSTSTSTG LSSATSSIAS LSTSTSTGIG 
SLSTGLSTTD STVASLSTST STGLSSATSS IASLSTSTST GIGSLSTGLS TTNSTVASLS 
TSTSTGLSSA TSSIASLSTS TSTGIGSLST GLSTTDSTVA SLSTSTSTGL SSATSSIASL 
STSTSTGIGS LSTGLSTTNS TVASLSTSTS TGLSSATSSI ASLSTSTSTG IGSLSTGLST 
TNSTVASLST STSTGIGSLS TGLSTTNSTV ASLSTSTSTG IGSLSTGLSS TNSNLVSLST 
SASTGIGSLS TSIDTTNSNL ASLSTSSSTG IGSLSTSINA TNSNLASLST SASTGIGSLS 
TSISSITTNT TNLGNSTAAA LGGGATYDPA TGAISAPSYT TYNANGTTAT NTSVGAAIDN 
INANGIKYFH ANSTDPDSVA TGTNSVAIGP NAVANVDYSV AIGSGATTSA AVPVASASVG 
GLTFGGFAGS APIGVFSVGA PGAERQITNV AAGRISAAST DAVNGSQLYA TNSNVASLST 
GLNATNSNLA SLSTSTSTAV GSLSTGLSTT NSTVASLSTS TSTSIGSLST GLSTANSNLA 
SLSTSTSTGI GSLSTGLATT NSNVASLSTS VTNINTQLTS LSTSITNNVI RSLPASTGVA 
ADMSAPKATS PSVTAGSNSV ALGAGSNDGG RSNVVSVGSD TQQRQITNVA AGTEGTDAVN 
VNQLNTLSTS MSQSLSNQQT QLNNLGSQLN QTQQQLQQTD TMARQGIAAV AAMASIPHMD 
RDSNFAMGVG TSSFLGQKAI AVGMQARITE NLKASLNGGF AGNQKVIGAG MLYQWK