Gene BURPS1106A_A1922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_A1922 
Symbol 
ID4905345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009078 
Strand+ 
Start bp1882358 
End bp1882999 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content72% 
IMG OID640145028 
Productputative aldolase 
Protein accessionYP_001075956 
Protein GI126456672 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCCCA TCGAGACGAA ACTGCGCGAG GAGATCTGCG AGATCGGCGC GAGCCTGTAC 
GCGCGCGGCC ACGCGGTCGG CAGCGCGGGC AACATCAGCG CGAAGCTCGA CGACGGCTGG 
CTGATCACGC CGACCGACGC ATGCCTCGGC CGCCTCGATC CGGCCGGCAT CGCGAAGGTC 
GATCCGGCGG GCAACGCGGT GTCGGGCGGC AAGCCGTCGA AGACGCTCGC GCTGCATCGC 
GGAATCTACG CGCGCAACGC CGAAGCGCGC GGCATCGTCC ACACGCATTC GACGCACCTC 
GTCGCGCTCA CGCTCGCGGG CGTCTGGAGC GAGGCCGACG TGCTGCCGCC GATCACGCCG 
TACTACGTGA TGAAGGTCGG CCATATTCCG CTCATCCGCT ATCGCCGGCC GGGCGACCCG 
GCGGTGGCCG CCGAAGTCGC GGCGCTCGCC GATCGCGTGC GCGGCGTGCT GCTCGAGCGG 
CTCGGCCCGG TGGTCTGGGG CCCGTCGGTC GCGCATGCGT CGTACGCGCT CGAGGAGCTC 
GAGGAAACCG CGCGCCTGTG GCTGATCACG CACCCGAAAC CCGAGCCGCT CGGCGAGCCC 
GCGCTGGCCG AATTGCGCGA CGCGTTCGGC GCGCGCTGGT AA
 
Protein sequence
MSPIETKLRE EICEIGASLY ARGHAVGSAG NISAKLDDGW LITPTDACLG RLDPAGIAKV 
DPAGNAVSGG KPSKTLALHR GIYARNAEAR GIVHTHSTHL VALTLAGVWS EADVLPPITP 
YYVMKVGHIP LIRYRRPGDP AVAAEVAALA DRVRGVLLER LGPVVWGPSV AHASYALEEL 
EETARLWLIT HPKPEPLGEP ALAELRDAFG ARW