| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A1901 |
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| Symbol | |
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| ID | 4904240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | - |
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| Start bp | 1864409 |
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| End bp | 1865218 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640145007 |
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| Product | YscJ/HrcJ family type III secretion apparatus lipoprotein |
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| Protein accession | YP_001075935 |
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| Protein GI | 126458134 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4669] Type III secretory pathway, lipoprotein EscJ |
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| TIGRFAM ID | [TIGR02544] type III secretion apparatus lipoprotein, YscJ/HrcJ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCGCTTC ACCGCCTTGT CGTGCGGCTT CTCGGCGTGC TCGCATTGAG CGTTCTGCTT
GCCGGTTGTA AGAAGGAGTT GTATACCGGC CTGTCCGAGC AGGACGTCAA CGAGATGATG
GTCGCCCTCC TCGAGAACGG CGTCGACGCA TCGAAGGATT CGGCCGATGG AGGCAAGAGC
TGGAAGCTGA ACGTCGATGG TGATCAGCTC GTTCATGCGA TGGAGGTACT GCGCACGCGT
GGTTTGCCGC GCAGCAAGTT CGACGACCTC GGCAACCTGT TCAAGAAGGA CGGCCTCGTT
TCGACGCCGA CGGAGGAACG GATTCGCTTC ATTTACGGCA TGTCGCAGGA GTTGTCGTCG
ACACTGTCGA AAATCGACGG CGTGCTGGTT GCACGCGTGC AGATCGTGCT TCCGAATAAC
GACCCGCTTG CGCAAACAGC CAAACCGTCA TCGGCGGCCG TATTCATCAA GTATCGGCCG
AGCGCCGACA TCACCGCGCT GATTCCGCAG ATCAAGACGC TGGTCATGCA TAGCGTGGAG
GGGCTGACCT ACGACCAGGT CAGCGTGACG GCGGTGGCGG CGGATGCCGT CGACCTTGCG
CGATCGCGTC CTGCGGCGGT GATCATGCCG CCCTGGCTGG TCGGGCTGCT GGCGTTCGGG
GCGGTGTCGA TCGCGGCGGC GGGGCTGTTT GTTGTGTCAA GGCGCCCTTG GACGAGGGCG
GGCGCACATG AAGCCGGCAG CGCAGCGCCA TGGCGCAAGC GCGTCGCCGA ACTCGCCGCG
CATTTGCGCC GCCGTCAGCG GGCGAACTGA
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| Protein sequence | MPLHRLVVRL LGVLALSVLL AGCKKELYTG LSEQDVNEMM VALLENGVDA SKDSADGGKS
WKLNVDGDQL VHAMEVLRTR GLPRSKFDDL GNLFKKDGLV STPTEERIRF IYGMSQELSS
TLSKIDGVLV ARVQIVLPNN DPLAQTAKPS SAAVFIKYRP SADITALIPQ IKTLVMHSVE
GLTYDQVSVT AVAADAVDLA RSRPAAVIMP PWLVGLLAFG AVSIAAAGLF VVSRRPWTRA
GAHEAGSAAP WRKRVAELAA HLRRRQRAN
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