Gene BURPS1106A_A1841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1106A_A1841 
Symbol 
ID4904128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1106a 
KingdomBacteria 
Replicon accessionNC_009078 
Strand
Start bp1811508 
End bp1812944 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content70% 
IMG OID640144947 
Productmajor facilitator family transporter 
Protein accessionYP_001075875 
Protein GI126455969 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGCCG CTCCCGCCGT CCCGTCGCGC GCCGCACGCG CCAGCGCCGC CGCCCGCCTC 
GAACGATTGC CGTTTTCCGG ATACCACAAG CTCATCTTCG TGATCATCGC GATCGCGTTC
TTCTTCGATT CGGTCGACCT CGGCACGATG ACTTTCGTGC TCGGCTCCAT CAAGCGGGAG
TTCGGCCTGT CGACGGCGAC AGCCGGCCTC GTCGCGAGCG CGAGCTTCTT CGGCATGGTG
CTCGGCGCGG CGGTCGCGGG GCTGCTCGCG GACCGCTTCG GCCGGCGGCC CGTCTTCCAG
TGGAGCATGG TGCTATGGGG CGCGGCGTCG TACCTGTGCT CGACCGCGCA GAGCGTCGAC
GCGCTGATCG TCTATCGCGT GCTGCTCGGC ATCGGCATGG GGATGGAATT CCCGGTCGCG
CAAACGCTGC TGTCCGAGTT CGTTCCCGCC GCGAAGCGCG GCCGGCTGAT CGCGCTGATG
GACGGCTTCT GGCCGCTCGG CTTCATCACC GCCGGCATCG TGTCGTACTT CGTGCTGCCG
CTGTTCGGCT GGCGCACCGT GTTCGCGCTG CTCGCGCTGC CCGCCGTGTT CGTGCTCGTC
GTGCGCCGGC TCGTGCCGGA ATCGCCGCGC TGGCTCGAAC ATCGCGGCCG GCTCGCCGAG
GCCGGGCGCG TGCTCGCGCA CGTCGAGGCA AAGGTCATGC AGTCCGCGCG CGTGGCGAGC
CTGCCCGCGC CGTCGCGGCT TGCCGAGCCG GCTTGCGCGC AGGGCCGCGG TGCGTTCGGC
GAGATCTGGA GCGCCGCCTA CCGCCGCCGC ACGACGATGG TCTGGCTGCT GTGGTTTTTC
GCGCTGCTCG GTTTCTACGG GCTCACATCG TGGCTCGGCG CGCTCCTGCA GCAAGCCGGC
TTCGCCGTCA CGCAATCCGT GTTCTATACG GTGCTGATCT CGCTCGGCGG CATTCCGGGC
TTCCTGTGCG CGGCGTGGCT CGTCGAGCGC TGGGGCCGCA AGCCGACCTG CATCGCGTCG
CTCGTCGGCG GGGGCGCGAT GGCCTACGTG TACGGCCAGA GCGCGCTGTT CGGCGGCAGC
GTGACGCTGC TCGTCGGCAC CGGACTCGCG ATGCAGTTCT TCCTGTTCGG GATGTGGGCA
GTGCTCTACA CGTACACGCC GGAGCTCTAC GGCACGGGCG CGCGCGCAAC CGGCTCGGGT
TTCGCGTCGG CGATCGGGCG GGTCGGCTCG CTGATCGGGC CGTACGCGGT CGGCATCGTG
CTGCCCGTAT TCGGACAAGG GGGCGTGTTC ACGCTCGGCG CGCTGTCGTT CGTCGTCGCG
GCACTGGCGG TGGGCGTGCT GGGAATCGAG ACCCAAGGCC TGGCGCTCGA GGCGCTCGCG
TCGACGCATG CCGCCGACGA CGATGCGCGC GATCCCGCGG GCGCGGCGGC GAACTGA
 
Protein sequence
MPAAPAVPSR AARASAAARL ERLPFSGYHK LIFVIIAIAF FFDSVDLGTM TFVLGSIKRE 
FGLSTATAGL VASASFFGMV LGAAVAGLLA DRFGRRPVFQ WSMVLWGAAS YLCSTAQSVD
ALIVYRVLLG IGMGMEFPVA QTLLSEFVPA AKRGRLIALM DGFWPLGFIT AGIVSYFVLP
LFGWRTVFAL LALPAVFVLV VRRLVPESPR WLEHRGRLAE AGRVLAHVEA KVMQSARVAS
LPAPSRLAEP ACAQGRGAFG EIWSAAYRRR TTMVWLLWFF ALLGFYGLTS WLGALLQQAG
FAVTQSVFYT VLISLGGIPG FLCAAWLVER WGRKPTCIAS LVGGGAMAYV YGQSALFGGS
VTLLVGTGLA MQFFLFGMWA VLYTYTPELY GTGARATGSG FASAIGRVGS LIGPYAVGIV
LPVFGQGGVF TLGALSFVVA ALAVGVLGIE TQGLALEALA STHAADDDAR DPAGAAAN