| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1106A_A1827 |
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| Symbol | |
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| ID | 4905868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1106a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009078 |
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| Strand | - |
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| Start bp | 1794846 |
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| End bp | 1796429 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640144933 |
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| Product | NodT family efflux transporter outer membrane lipoprotein |
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| Protein accession | YP_001075861 |
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| Protein GI | 126456129 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.108325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCAGA CCGCAACGCA CGCAGCCACA CGCACGACGA CCCTGCCGGT CCGCCGCCCC
GCGCGCCGGC TCGCGGCGCT CGCGCTCGCC TGGGCGCTCG CCGGCTGCGT GCCGTCGGGC
CTGAAGCCGA CGCTCGCGCC GCGCACGCCC GGCGACGACG CGCTCGCGCA CACCACCGGC
GGCGCGACGC ACGGCGCATG GCCGAGCCCG GACTGGGTGC GCCAGCTCGG CGATCCGCAG
CTCGACGCGC TCGTCGACGA AGCGCTGCGG CAGAACCCGA CGCTGCAGGC CGCGCAGGCG
CGCATCGGCG TCGCGCAGTC GCAGCTGCAG CAGTTCGAAT CGCTGACGGG GCTCACCGCG
ACGGCGGGCG CCTCGCTCTC CAAGGCGCAC GTGCCGCGCT CGGGCGGCAC CCTCAATACG
ACGCTGAACG GCTTGCCGGT GTCGGTGCCG CTCGTGGGCG AATCGGTGGT GTCGTCGTCG
TCGCTGTTCG TCGGGCTGAA CTATCAGCTG GACCTGTGGG GCAAGAACGC GGCGGCCACG
CGCGGGCTGC TGTCGATGCG CGATGCGGCG CGCGTGGAGG CCGAGCAGGC GCGGCTCACG
CTGTCGGTGG CGATCGTGAC GCTGTACGGC GAGCTGGACC GCGCGTATGC GCTGCGCGAG
CTGCTGCAAC AGAAGCGCCG CGCGAGCGAG CAGGTCGAGG CGGTGCTGCG CGAGCGCGCG
GCGCGCGGGA TCGACAACGG CTACGACGCG GACGACGCGG CGCTCAAGCG CGGCAAGCTG
CTCGAGCAGA TCGCGCTGAC CGACGAGCAG ATCCAGTTGC AGAAGCTGCA GCTGGGCGTG
CTGAGCGGAC GGGGGCCGGA GCGCGGGCTG TCGCTCGCGC GGCCGAAGCT CGCGCCGCTC
GCGGACGCGC CGCTGCCCGC GCGGCTGCCG GCCGAGCTGC TGGGGCGGCG GCCGGACATC
GTCGCGGCGC GATTGCGGGT GGAGGCGGCG TACGCGGCGA TCGACGGCAC GCGCGCGTCG
TTCTACCCGG ACGTGAACCT GGCGGCGCTG GGCGGGCTGT TCGCGCTCAC GCCGGCGTCG
CTGTTCAGGC ACGATGCGCT GGGCGGCTCG ATCGGGCCGG CGCTGTCGCT GCCGATCTTC
GATCGCAGCC GGCTGAAGGC GAAGCTGGGC GGCGACGTGG CGAACGCGGA CATGGCGCTC
GCGCTGTACA ACCAGACGGT GGATGCGGCG CTGGGCGAGG TGGCGCGGCA GTTGACGTCG
CTGGCGACGC TCGACACGCT GCTGAAGGCG CAGCAGCAGG CGCTGCGCGC GGCGCAGCGG
ATGGTGGCGC TGGCGCAGGA CCGGCATCGC CGGGGGATGG GGATGCGCAA GGACATCGAC
GTGGCGCAGC TCACGCTGCT GGACGAGCGC GCACACGTGG TGGAGCTGCA GGCGCGGCGG
CGCACGCTGC GGGTGGGGCT GATCGGCGCG CTGGGCGGCG GCTTCGACGC GCGGCCGGCG
AGCGGCGCGC CGCCCGCGCA GGCGGGCCAG CCGTTCGCGG CGGCGTCGCG GCCGGTGGCG
GCGCACGATG CGCAACCTGA TTGA
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| Protein sequence | MTQTATHAAT RTTTLPVRRP ARRLAALALA WALAGCVPSG LKPTLAPRTP GDDALAHTTG
GATHGAWPSP DWVRQLGDPQ LDALVDEALR QNPTLQAAQA RIGVAQSQLQ QFESLTGLTA
TAGASLSKAH VPRSGGTLNT TLNGLPVSVP LVGESVVSSS SLFVGLNYQL DLWGKNAAAT
RGLLSMRDAA RVEAEQARLT LSVAIVTLYG ELDRAYALRE LLQQKRRASE QVEAVLRERA
ARGIDNGYDA DDAALKRGKL LEQIALTDEQ IQLQKLQLGV LSGRGPERGL SLARPKLAPL
ADAPLPARLP AELLGRRPDI VAARLRVEAA YAAIDGTRAS FYPDVNLAAL GGLFALTPAS
LFRHDALGGS IGPALSLPIF DRSRLKAKLG GDVANADMAL ALYNQTVDAA LGEVARQLTS
LATLDTLLKA QQQALRAAQR MVALAQDRHR RGMGMRKDID VAQLTLLDER AHVVELQARR
RTLRVGLIGA LGGGFDARPA SGAPPAQAGQ PFAAASRPVA AHDAQPD
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