Gene BURPS1106A_A1759 details

Gene Information

• Locus tag: BURPS1106A_A1759
• Symbol: pcaQ
• ID: 4906234
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009078
• Strand: -
• Start bp: 1733534
• End bp: 1734538
• Gene Length: 1005 bp
• Protein Length: 334 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 640144865
• Product: Pca operon transcriptional activator PcaQ
• Protein accession: YP_001075793
• Protein GI: 126456316
• COG category: [K] Transcription
• COG ID: [COG0583] Transcriptional regulator
• TIGRFAM ID: [TIGR02424] pca operon transcription factor PcaQ

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.0219488
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATAACC GGATCGCCGA CGGCCGGGTC AAGTTCCGGC ACCTGCAGTG CTTTCTCGCC 
GTTGCGCAGT TCGGCAGCGT GCAGAAGGCC GCGCACAGCC TGTCGATCAC GCAGCCCGCC 
GTGTCGAAGA CGATCGCCGA GCTCGAATCG ATCCTCGGCG TGCGGCTGTT CGAGCGCGGC 
CGGCAGGGCG CGCGGCCCAC GCGCGAGGGC CAGCTTTTCA TGCCGCACGC GAGCGCGTGC 
GTGCTCGCGC TGCGGCAGGG CGTGGGGCTG CTCGCGCGCG AGGGCGGCGG CGCGGCGGCC 
ACTCTCGAGA TCGGCATGCT GCCGACCGTC GCCGCGTCGC TCGCGCCCGC CGTGCTGAAA 
ACGCTCGCGG CCGAATGGCC GCGCGCGGTC GTGCGGATCA CGACCGTCGC GAACGCCGAG 
CTGCTCGAGC GGCTGAAGGC GGGGGCAATC GAATGCGCGA TCGGGCGGCT GTCGGAGCCC 
GAGCGGATGG TGGGGCTGTC GTTCGAGCAT CTGTACAACG AGCCGCTCGT CGCGGTCGTG 
CGCGCGGGCC ATCCGCTTGC GGCGAGCGCT TCGCCCGCCG CGCAGCTCGC GCGCTATCCG 
GTCGTGCTGC CGCCTTACGG CACGATGATC CGGCAAGCGG CCGAGCAATT GTTGAGCGCG 
TGCGGCGCGC CGCCGCTCGA ATCGTTCGTC GAGGTGCTGT CGGTGTCGGT CGCGCGCGCG 
CTCGCGCTCG AGAACGACGC GGTGTGGTTC GTGCCGCGCT ACGCGGCCGA ATTCGATCTC 
GCGGCCGGCA CGCTCACGCG GCTCGCGCTG CCCGTCGACG GCGCGGACGA GCCGGTCGGG 
CTGATCCTGC GCACCGACGC GCAGCCGTCA CCCGTCGCGC GCGCGCTGAT CGACGCGGTG 
CGCGCGATTG CGCGGCGGCG GCTTGCCGGA GCGGGCACGA CGAGCGGGCG CGCGCGCGGC 
GCGCGAGGCG CGACGGGCAA GGGGCGCGGT CGGCGGGACG CGTGA 

 

Protein sequence

MHNRIADGRV KFRHLQCFLA VAQFGSVQKA AHSLSITQPA VSKTIAELES ILGVRLFERG 
RQGARPTREG QLFMPHASAC VLALRQGVGL LAREGGGAAA TLEIGMLPTV AASLAPAVLK 
TLAAEWPRAV VRITTVANAE LLERLKAGAI ECAIGRLSEP ERMVGLSFEH LYNEPLVAVV 
RAGHPLAASA SPAAQLARYP VVLPPYGTMI RQAAEQLLSA CGAPPLESFV EVLSVSVARA 
LALENDAVWF VPRYAAEFDL AAGTLTRLAL PVDGADEPVG LILRTDAQPS PVARALIDAV 
RAIARRRLAG AGTTSGRARG ARGATGKGRG RRDA